| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1468 |
|---|
| Symbol | |
|---|
| ID | 6203766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 1619698 |
|---|
| End bp | 1620705 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641702981 |
|---|
| Product | beta-hexosaminidase |
|---|
| Protein accession | YP_001830153 |
|---|
| Protein GI | 182681993 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0176842 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTACTGA TTGGTGTGGC GGGTACGACG CTCAGTGCTC AGGAGGTGGA TTGGTTGCAG
GACGATGCGG TGGCCGGTGT TGTGTTGTTT AAGCGTAATT TTGCTTCACG TGCGCAAATT
GTCGAATTAT CGGCTGCGCT GCGTGAAGCT GCACCGCGGC CGCTGTTGTT GGCGGTTGAT
CAGGAGGGTG GGCGTGTGCA GCGCTTCCAT GAGGGCTATA GTGCGTTACC ACCATTACAG
GGGATTGGTG CATTGTATGT ACGCGATCCG GAGGCGGCAT TGGAGTTGGC GTTCGAGCAT
GCTTGGTTGA TGGCCAGTGA AGTTCGAGCC AGTGGTGTGG ATTTAAGTTT TGCTCCGGTG
GTCGATCTTG GGCGTGGCAA TCGTGCGATT GGCGATCGTG CTTTCAGTGA TGATCCGCAC
GTGGTGGCGG CGTTTGCCAA GGCTTATGTG CAGGGGATGC ATGCTGCTGG TATGCCAGTG
ACGCTTAAGC ATTTTCCTGG GCATGGTAGT GTTCTGGAGG ATACGCACGT TGATCTTGCA
GTGGATGTGC GTGCGTTGGA AACGCTTGAG TCTGAGGATT TGGTGCCGTT TGCGGCAGGC
ATTGCTGCCG GTGCGGATGC AGTGATGATG GCACATGTAG TTTATCCAAA TGTCGCGCCT
GAACCGGCAG GTTTTTCTGC GCATTGGATC GAGGTTATTT TACGTGGGCG CATGGGGTTT
CGGGGGGTGG TTTTTTCTGA TGACATCGGT ATGGCTGCTG TGCGTGGCGT TGGTGGTGTT
GTTGGCTGTG TGCACGCGCA TCTTGATGCT GGTTGTGATG TGGTTCTGGT GTGTCATCCG
GAATTGGTGA ACGATGCGCT GTCTGCTGTT GCTGGCCGTC GTTCCAATAC GGCTGCTCTT
ATTGGTTTGA TCGGTCGCGG TGTGCTTGGT TGGGATGGGC TACTGGCCGA TGTTCGTTAT
GGTTCCATTC AATCCCATTT ATTTGAACGA TTCGGAACAT CCACTTGA
|
|---|
| Protein sequence | MLLIGVAGTT LSAQEVDWLQ DDAVAGVVLF KRNFASRAQI VELSAALREA APRPLLLAVD
QEGGRVQRFH EGYSALPPLQ GIGALYVRDP EAALELAFEH AWLMASEVRA SGVDLSFAPV
VDLGRGNRAI GDRAFSDDPH VVAAFAKAYV QGMHAAGMPV TLKHFPGHGS VLEDTHVDLA
VDVRALETLE SEDLVPFAAG IAAGADAVMM AHVVYPNVAP EPAGFSAHWI EVILRGRMGF
RGVVFSDDIG MAAVRGVGGV VGCVHAHLDA GCDVVLVCHP ELVNDALSAV AGRRSNTAAL
IGLIGRGVLG WDGLLADVRY GSIQSHLFER FGTST
|
|---|
| |