| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1464 |
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| Symbol | |
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| ID | 6202222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 1615000 |
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| End bp | 1617195 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641702977 |
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| Product | autotransporter beta-domain-containing protein |
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| Protein accession | YP_001830149 |
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| Protein GI | 182681989 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5563] Predicted integral membrane proteins containing uncharacterized repeats |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0611426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTAA AATTTCAAAA AAGAAAATTT TTGACTGTAG TTATCGTATT TTCTATGTAT
GGGGGCAGTG TTGTATATGC GAATGGGAGC GTGCCATCAG TATCAAACAA ATATGATTTG
GGAACGTTGA CAAATGATGG TTCTCAATAT TCATATGTTA ATGCTCTCTC AAAGGATGGT
AGGGTGGCTG GTGGATTTGT TACTCCTGAT GGTAATGAAT ATATTGCAAC TATTTGGTCA
TGGAATAATC TCAAGGATAC AATTAATATT GGAGCATCTT TTGCGCGTAG TAAAGTGAAA
GCATTGTCTG CTGATGGATC AATTGCCGGT GGTTATCAAT ACATCAGAAT TCATGAATCT
ATTTCGAGTG CCAATTTGGA AAAGAAGGCA TCTAATGGAA AGTTTCTAGC CAATGATGAT
TCAGCTACTT TTATTCCAGT CATTTGGTCT GCTGACTCAT GGGAGAATGA AGTCAAGCTT
GAATTGGGGA TTTTAGAATC CGGAGTGGTT AATGCATTAT CTGGGGATGG AAAAACTATT
GGTGGGTACG GTTTCTCTAC TCATCTTGTT CCCATTATCT GGTCTGGAAG TCATTGGAAA
GATATAAAAC AGCTTGATGT ACCAAAAGAA TATTATGATG CTGAGGTGAA GGCTTTATCC
ACGGATGGAA AGGTTGCTGG GGGGTATATT AGTTCAAAGA ACACTACAAG GGGTATTTTA
GAAGGGAAAA GTAGAAATGA TATCCAAAAT TTTACGCATG CATTTATTTG GTCAGGCGAT
GGTTTTGGAA TAAAAACTGA TTTGGGAACA TTGAATAATA ATGAATCCGA AGGGGCTGAG
GTGAGAGCAC TTTCTACTGA TGGGAAAGTG GCAGGTGGTT ATTTTTCTAT GGAAAATGGC
AGTGTTTTTT ATGGGGCCAT CTGGTCTGGT GATCAATGGA CAACGAAAAC TCAGCTTGGA
ACATTGAAAA GTGATAATTC AGGGAATTCT TTGGTTTATG CACTTTCCGC TGATGGGAAA
ATCGCTACAG GGTTTGCTGA ATCTGATTCC TCTATAGGGC GTGCCACTGT TTGGTTGGGG
GATCACTGGC AAACGAAAAT CGATCTGGGA ACATTAAAAA GTGATAACTC GGGATATTCC
ATTGCTACTG CACTCTCTGC AGATGGAACA GTTGCAGCAG GGTATTCTGA AGTAGATTCA
GGAAAAGACC ATGCCACTGT CTGGAAGATC ATTTATCCAA CGCAATCTCA CTCTGAATCT
CAGCCCCAAT CCCAACCTAG CGTGGTCAAG GTAGATACTG TCAATACCAT AGGTGCCTTA
TCGGTGTTGG CCGCAGAGAC ATTTTCAGTT ATGGATTTGC AGCGCCAAGG ACTCATCCTT
CTACAGCAAG GATGTGAGAT TGATGACAGC CAGGTCTGCT GGTCTGTGCG TACTGGGCTC
GTCTCTACAG GAAGCAATCG GGACAGTGTC GTTGGTTTCA GATTCGGTTA TGCCATGTTT
GAAACGTTGT CTGCAGGTTT CTCGCTGGAC CGTTCACTGT CCCGCTCATT GCAGGACAGT
TATTTCAAGA ACAATCACAA TCTGGGTGCA GGGTTTTATG CACAATGGAA TGCTCCCTTT
AGGGGAGGTG AATGGTATGT GCGTCCAGCC GTGGCTTTCA ATCAGTACAG CGTGGTTGTG
CAACGTCCGT TGTTAACAAA TACAGAGGCA GGATCCGGTC GCAGTCGTAT GAAAGGTCGG
GATGCCTCGC TGGAAGCAGG GCAACGTTTC AATGCCGATC AAAGTGTTTT ATTGGGGTGG
CATCTGGGAG TGCGTCATAG CAGTGTCTTG CGTACTGCAT ACAGCGAGCA GAATGCAGCG
TTCCCTGTCA GCTATAGTGC GATCAATAAT CGGCGTACTT CTGCGTATGT TGGTGCGGAT
GTTGCGGTGC CGCTAACAGC ACGTTTGAAA TGGATTGCAG GTCTTGAAAT TGATAGGAGG
CTTTATGGAG ATGATCCAGT ATATGGCGGG CATGCTGATT ATATTGGTGG CTTTGTACAT
CAAATGGTTA TGAAGCGCGT GATAGGGACA ATAAGCAGCG GTGTGGAGTA TCGCCTAAGT
CCAACCATGT TTTTGGGGGC GACGTTCGAT GTCAGCAGGA GGGCACTGGG TGATAGGACC
TGGAGTGGGA CGTTGAGTTT GGGCGGCCGT TTTTAA
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| Protein sequence | MKLKFQKRKF LTVVIVFSMY GGSVVYANGS VPSVSNKYDL GTLTNDGSQY SYVNALSKDG
RVAGGFVTPD GNEYIATIWS WNNLKDTINI GASFARSKVK ALSADGSIAG GYQYIRIHES
ISSANLEKKA SNGKFLANDD SATFIPVIWS ADSWENEVKL ELGILESGVV NALSGDGKTI
GGYGFSTHLV PIIWSGSHWK DIKQLDVPKE YYDAEVKALS TDGKVAGGYI SSKNTTRGIL
EGKSRNDIQN FTHAFIWSGD GFGIKTDLGT LNNNESEGAE VRALSTDGKV AGGYFSMENG
SVFYGAIWSG DQWTTKTQLG TLKSDNSGNS LVYALSADGK IATGFAESDS SIGRATVWLG
DHWQTKIDLG TLKSDNSGYS IATALSADGT VAAGYSEVDS GKDHATVWKI IYPTQSHSES
QPQSQPSVVK VDTVNTIGAL SVLAAETFSV MDLQRQGLIL LQQGCEIDDS QVCWSVRTGL
VSTGSNRDSV VGFRFGYAMF ETLSAGFSLD RSLSRSLQDS YFKNNHNLGA GFYAQWNAPF
RGGEWYVRPA VAFNQYSVVV QRPLLTNTEA GSGRSRMKGR DASLEAGQRF NADQSVLLGW
HLGVRHSSVL RTAYSEQNAA FPVSYSAINN RRTSAYVGAD VAVPLTARLK WIAGLEIDRR
LYGDDPVYGG HADYIGGFVH QMVMKRVIGT ISSGVEYRLS PTMFLGATFD VSRRALGDRT
WSGTLSLGGR F
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