Gene XfasM23_1463 details

Gene Information

• Locus tag: XfasM23_1463
• Symbol: smpB
• ID: 6202429
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M23
• Kingdom: Bacteria
• Replicon accession: NC_010577
• Strand: +
• Start bp: 1614296
• End bp: 1614799
• Gene Length: 504 bp
• Protein Length: 167 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 641702976
• Product: SsrA-binding protein
• Protein accession: YP_001830148
• Protein GI: 182681988
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.0677616
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACAACA AACATCCCAA GAATAAAGCA AAGAGCACAA CAACTCCAAA AACCATCGCT 
CTGAACAAAC GTGCACGTCA TGAATACCAT CTGATTGAAC GCCATGAAGC CGGTCTGGAA 
CTGCAAGGCT GGGAAGTCAA AGCAATCCGT GCTGGCCGTG CCAACCTTGG CGACGGCTAT 
GCCTACGTGC GCGACGGCGA AATCTTTCTC ATCGGTGCCC AAATCACTCC GCTCATCCAA 
GCATCCACCC ACGTTGTCGC CAACGACCGC CGTACCCGCA AACTACTGCT GCACCGCCAC 
CAAATCGACA CACTGATCGG ACGAGTACAA CGTGAAGGCT TCACCCTGGT CCCAACTGCG 
ATGTACTGGA GCAAAAATCG AGTCAAAATG GAGATTGCTC TAGCCAAAGG TAAACAGGCC 
CATGACAAGC GCCATGCAGA GAAAGAACGC GAATGGCAAC GCGACAAACA GAGGATCATG 
CGGGCCCATA ATCGCAACGC ATGA 

 

Protein sequence

MNNKHPKNKA KSTTTPKTIA LNKRARHEYH LIERHEAGLE LQGWEVKAIR AGRANLGDGY 
AYVRDGEIFL IGAQITPLIQ ASTHVVANDR RTRKLLLHRH QIDTLIGRVQ REGFTLVPTA 
MYWSKNRVKM EIALAKGKQA HDKRHAEKER EWQRDKQRIM RAHNRNA