| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1452 |
|---|
| Symbol | |
|---|
| ID | 6202412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 1603300 |
|---|
| End bp | 1604013 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641702965 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001830137 |
|---|
| Protein GI | 182681977 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCAGA CCAAGGAAAC CTCAGGGCTT GTCCTGATAG TGGAAGATAA CCGCAACATC
TCAGAGATGA TCGGCGAATA CTTGGAAGGC CGTGGCTTTG AGGTGGATTA CGCAGTCGAT
GGGTTGGATG GCTATCGTTT GGCCGTTGAG AACAGCTATG ACGTGGTGGT ACTCGATTTG
ATGTTGCCAC GCCTGGATGG CATAGAGGTT TGTCGCCAGC TACGTAAGGA CGCACGTAAA
TCGACACCTG TGCTGATGTT GACAGCGCGT GACACACTGG ACGACAAGCT CACCGGATTG
GGATTCGGTG CTGATGATTA TCTGACGAAG CCATTTGCAA TTCAGGAGTT AGAAGCTCGC
TTGCGTGCTC TCATCCGTCG GGAGCGTCGC CAAGTTGGTG CGGAAGTGTT GAAGCTTGCT
GATCTTGTCC TGGATCCGGT GAGCCTGCGT GCTACCCGTG CCGGTACTGA GCTGCAACTT
TCCCCGATTG GGCTACGTCT TCTGACGATC TTGATGCGGG AGTCACCACG TGTCGTCAGT
CGCCAGGAGA TTGAACGCGA AATCTGGGGA AACTGTTTGC CGGATTCGGA TACATTGCGC
AGCCATCTAT ATAACCTGCG TAAGGTGGTT GATAAGCCAT TTGGCCGACC GCTGTTACAC
ACGGTACAGA GCGCAGGCTA CCGGATGGTT GATATCGAAC AATCAATGGA TTGA
|
|---|
| Protein sequence | MRQTKETSGL VLIVEDNRNI SEMIGEYLEG RGFEVDYAVD GLDGYRLAVE NSYDVVVLDL
MLPRLDGIEV CRQLRKDARK STPVLMLTAR DTLDDKLTGL GFGADDYLTK PFAIQELEAR
LRALIRRERR QVGAEVLKLA DLVLDPVSLR ATRAGTELQL SPIGLRLLTI LMRESPRVVS
RQEIEREIWG NCLPDSDTLR SHLYNLRKVV DKPFGRPLLH TVQSAGYRMV DIEQSMD
|
|---|
| |