| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1448 |
|---|
| Symbol | |
|---|
| ID | 6202408 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 1600233 |
|---|
| End bp | 1600799 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641702961 |
|---|
| Product | dihydrofolate reductase |
|---|
| Protein accession | YP_001830133 |
|---|
| Protein GI | 182681973 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0262] Dihydrofolate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAGACGC ATCTCAAGAA AGCCAGAGAA AATAATGAAT ATCTACAACG TGTTGTACGT
AGTGCCATGA TTGTTTCCTT AATTGCGGCG TTGGATCGTT ACCGCGCCAT TGGTCGTGAT
AATGGGTTGC CGTGGCACTT GCCGGACGAT CTGAAGCGTT TCAAAGCATT GACTTTAGGT
CGACCGGTGC TGATGGGACG CAAGACTGCG CATTCCCTTG GACGTCCCTT ACCAGGGAGA
ACCAATCTGG TATTGACGCG TTCTGGACAC GTGCCATTTT CTGAAATGCG GGCGGTGGAT
TCGCTTGATG CAGCTATCGT CCAGGCGGCT GCGGAGGGTG CCGACACGTT AAGTGTGATT
GGTGGAGGTG AACTGTATGC ACTGACTTTG CCGCACGCCA ATGCGATGTA CTTAACTCAC
GTGGATGTGG CTGTTGCGGG CGCTGACACG TATTTTCCTA TGTTCGACGC CGTCGATTGG
GAGATCAAGA ACCGTGAACC CCATCAGGGC GATGGGCGTC ATGCCTACCC GTTCACCTTC
ATAGACTATT GCCGCCGATT GCGTTAG
|
|---|
| Protein sequence | METHLKKARE NNEYLQRVVR SAMIVSLIAA LDRYRAIGRD NGLPWHLPDD LKRFKALTLG
RPVLMGRKTA HSLGRPLPGR TNLVLTRSGH VPFSEMRAVD SLDAAIVQAA AEGADTLSVI
GGGELYALTL PHANAMYLTH VDVAVAGADT YFPMFDAVDW EIKNREPHQG DGRHAYPFTF
IDYCRRLR
|
|---|
| |