Gene XfasM23_1410 details

Gene Information

• Locus tag: XfasM23_1410
• Symbol: uvrC
• ID: 6202358
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M23
• Kingdom: Bacteria
• Replicon accession: NC_010577
• Strand: +
• Start bp: 1567624
• End bp: 1569489
• Gene Length: 1866 bp
• Protein Length: 621 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 641702926
• Product: excinuclease ABC subunit C
• Protein accession: YP_001830099
• Protein GI: 182681939
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0322] Nuclease subunit of the excinuclease complex
• TIGRFAM ID: [TIGR00194] excinuclease ABC, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGATA ACGCACCAAT CACATTTGAT GGAAAAAGGT TCGCCGCACA TCTGAGTACG 
GCGCCTGGCG TCTATCGTAT GTACGCTGCT GACGACACGT TGTTATACGT TGGCAAAGCA 
GGGGCGCTGC GCAAACGCGT TGCCAGCTAT TTCAATGGCA CTCCAAAAAA TACCCGGCTG 
ACCGCCATGC TCGCCCAGGT GGTACGCATG GACGTCACCA TCACGCGCAA CGAAGCCGAA 
GCCCTGCTGC TGGAGAACCA GCTCATTAAA TCACTGACTC CGCGCTATAA CGTCTTGCTG 
CGAGACGACA AGAGTTATCC ATACGTACTG CTGACACGTG AGGCATGGCC ACGCATTGCA 
CTACATCGCG GCCCACAGAT CGTTCCAGGC CGCTACTTCG GCCCCTATCC TGGGGTGACC 
GCGGTACGCG ACATGCTGAA TCTCATACAC AAACTATTCA AACTACGCAG TTGTGAAGAC 
AGTGTGTTCC GCAACCGTTC GCGACCATGC CTGCAATATC AAATTGGACG TTGCAGTGCA 
CCATGTGTCA ACGTGGTCAC ACACGATAAT TACACTGAGG CAGTACACCG TGTGACGCTG 
TTTCTTGAAG GGAAAAGCGA TCTGCTTGCA GAAGAGTTGA TACAAGCAAT GCAAGTTGCC 
AGTGAACATC TGGAATTCGA GCAGGCCGCG CGGTTGCGCG ACCTGCTCAC CTCATTACGC 
AGCATGCAAA ATCGGCAATA CGTGGACGGA CGCGCCGCAG ATTTAGATGT GCTGGCCTGC 
GCGGCTCTAT CCGGTCACGC CTGCGTACTG CTGCTCAGTT TCCGTGATGG CCGCAATCTT 
GGCACACGTA TGTTCTTTCC CAAGACAAAT GGTGAAGAAC GCACCGCTGA GATACTCAGT 
GCCTTTGTCT CTCAATACTA CGCGGAGTAC CCACCTCCAC CGGAGATCCT GCTGGACCAA 
GAAATCCCCG ATCACACACT CCTGGAAGCC GCATTCAGTC GTTCCAGCGC ACATAAAATC 
AGCCTACGCT GGAACGTCCG TGGTGAGCGT GCCGGTTACG TCGAGTTAGC CGTACGTAAC 
GCTCAAGTAG CCTTATCCAC CGAACTCACC AGCCAACGTG CCCAGCGGGT ACGTAGTGAA 
GCAGTACGTC AACTGCTCGG TCTGGAGGGG CCGATTAAGC GTGTAGAATG CTTCGACATT 
AGTCACACGA TGGGTGAGGC CACGGTTGCC TCCTGTGTGG TGTTTGATGC TGTTGGTCCG 
GTACGTTCCC AGTATCGGCG TTACAACATC ACTGGCATTA CCCCTGGTGA CGACTATGCA 
GCAATGCGTC AGGCCATCGA GAGGCGCTTC CGCCGTGCGG TTGAAGAAGA CAAACAGGGA 
GAACGACCGG ACGTGCTATT CATTGACGGT GGTGCTGGCC AGTTGGCACA AGCCAAGATG 
GCACTCAACG CTGTTGGGGT GGAAAGCGTG CTGCTGGTCG GCGTGTCCAA GGGCGAAGAG 
CGCCGTGCAG GACACGAGAC GCTGATTATG CTGGATGGAC AGGAGCTGCA TCCTGGAGCA 
GCTTCACCCG CGTTGCAGTT CATCCAGCAG GTGCGTGACG AGGCACACCG ATTTGCAATC 
ACTGGACACC GCGCACGTCG GCAAAAAACG CGGATGACCA GTAAATTAGA AGACATTCCT 
GGAATCGGCT CACGCCGCCG CGCCAATCTT CTCAAGCATT TTGGTGGACT GGCGGGAGTC 
AAAGCTGCTG GCCAAACCGA GATTGCCAGG GTGGAAGGCA TCAGTACTGC GCTGGCAGCC 
AAGATTTACG CCAGCCTGCA TGGACTATCG AAAAATGATG CAGCAAATGC GTCGAGGGTG 
TCATGA 

 

Protein sequence

MTDNAPITFD GKRFAAHLST APGVYRMYAA DDTLLYVGKA GALRKRVASY FNGTPKNTRL 
TAMLAQVVRM DVTITRNEAE ALLLENQLIK SLTPRYNVLL RDDKSYPYVL LTREAWPRIA 
LHRGPQIVPG RYFGPYPGVT AVRDMLNLIH KLFKLRSCED SVFRNRSRPC LQYQIGRCSA 
PCVNVVTHDN YTEAVHRVTL FLEGKSDLLA EELIQAMQVA SEHLEFEQAA RLRDLLTSLR 
SMQNRQYVDG RAADLDVLAC AALSGHACVL LLSFRDGRNL GTRMFFPKTN GEERTAEILS 
AFVSQYYAEY PPPPEILLDQ EIPDHTLLEA AFSRSSAHKI SLRWNVRGER AGYVELAVRN 
AQVALSTELT SQRAQRVRSE AVRQLLGLEG PIKRVECFDI SHTMGEATVA SCVVFDAVGP 
VRSQYRRYNI TGITPGDDYA AMRQAIERRF RRAVEEDKQG ERPDVLFIDG GAGQLAQAKM 
ALNAVGVESV LLVGVSKGEE RRAGHETLIM LDGQELHPGA ASPALQFIQQ VRDEAHRFAI 
TGHRARRQKT RMTSKLEDIP GIGSRRRANL LKHFGGLAGV KAAGQTEIAR VEGISTALAA 
KIYASLHGLS KNDAANASRV S