Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1386 |
Symbol | |
ID | 6202314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 1539270 |
End bp | 1541231 |
Gene Length | 1962 bp |
Protein Length | 653 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641702905 |
Product | OPT family oligopeptide transporter |
Protein accession | YP_001830078 |
Protein GI | 182681918 |
COG category | [S] Function unknown |
COG ID | [COG1297] Predicted membrane protein |
TIGRFAM ID | [TIGR00728] oligopeptide transporters, OPT superfamily [TIGR00733] putative oligopeptide transporter, OPT family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAACG ATATTTCTCC CCGTCAACTT ACCTTCCGTG CTGTGGTGCT CGCGGTTGTG TTGGCGGTTG TGCTGTCTGC GGCTAACGCG TATCTGGGGT TGTTTGCCGG TTTGACCATT GCGACAGCAA TCCCGGCGGC GGTGGTATCG ATGGGGGTGC TGCGTGTATT GGGTGGCAGT TCGATCTTGG AAAACAATAT TGTCCAGACC GGCGCTTCGG CTGGTTCGTC GGTTGCTGCT GGGGTGATCT TCACTATTCC GGCGTTGGTC ATCATGGGGT ACTGGCCGGA CTTTAAATAC TGGTGGGTGC TTGGTATTGC GGGTCTGGGT GGTTTGCTGG GTGTGCTGTT TTCGGTGCCA TTACGGCGTT CGATGATTGT CGAGGAGCCG CTGCCGTTCC CTGAAGGCAA GGCCGCGGCC GAGGTGTTGA AGGCGGGTGA GAATCCTGGG CCAGGGCTTA AAATTTTGGC GCTGTCTGGC GGGATAGGTG CTTTAGTGAA GTTAGCTGCT GCCAGTGGTT TGAAGTTGAT TCCAGATACT TGGTCGCAGG CGGCCTATCT GGGGAGCAGC AAGGTGGTGG GGTATATCGG TACCAATTTG TCGCCTGCAC TGCTGGGGGT TGGTTACATT GTGGGTCTGA ATGTGGGGAT TGTGGTGTTG TCAGGTTCAA TTCTGTCTTG GCATGTGGCC ATTCCGCTCT ATCAGCAGTT TTTCATGGGG AGTGATCCGG AGTTGGCACA GCGTCTGGCG ACGGTGACGG CTGCCGAAGC GGCGTTTAGT GTCTGGGGGG AAAAGATCCG TTATCTCGGT GTGGGTACGA TGCTGATTGG CGGTGTATGG ACGCTGTTTT CACTGCGTAA GTCGTTGCTG AGGGGGATTA AAAGCGGTTT TGCTGCGGCG CGTAAGGGGG GCGGTCAGGT GGTGTCACAT ACCGAGCGCG ATTTGCCGAT GACGTGGATG TTGGTGGCGC TGGCGGTGTT TACGTTGCCG TTGCTGCTGT TGTATCAGTC GATCGTGCAG CAATGGCAGG TGTCGGTGCC GATGACGATG ATTATGATCG TGGCTGGTTT TTTGTTTGTG TCGGTATCGG GATATTTGGC TGGCATGGTG GGTTCTTCTA ATAATCCAGT GTCTGGTATC ACGATTTCTA CGATCTTGTT TGCTTCTGCG GTATTGGTCT TGCTGCTGGG CCGCAATGGG TTGGTGCCGA TCGGGAGTGG TGGTGCGCCG TTGGGTGCCG TGGCTGCGAT TATGATTGGT GCGGTGGTGT GCTGTGCGGC AGCGGTGGGC GGAGATAATT TGCAGGATCT CAAGGCAGGT TATTTGGTGG GTGCTACGCC GTGGAAGCAA CAGGTGATGA TGGGGATTGG CACGTTCTCG TGTGCTCTGA TCATGGCACC GGTGCTGAAT TTGTTGGCAC ATGCGTATGG GATTGGTCCA GCGACACCGC AGCATCCGAA TGCGCTGAGT GCTCCGCAGG CAACGTTGAT GGCGTCGGTG GCGCGTGGTC TGTTTGGCGG CCAGTTACCA TGGACGATGA TTGGGGCGGG TGTGTTGATT GGCGCTTTCA TCATTGGGAT TGATGAGTGG CTCAAGGTGC GTGGTGCACG TTTCCGTGTT CCGGTGCTGG CCGCAGCGAT TGGTATCTAT TTGCCGTTGG AGTTGATGGT GCCAATTTTC TTGGGGGGTG TGTTGTCATA TGGTGTGGAG CGTGCTCACA AGGTGCGTCG CGGTGATGAG GCTGAGCGTG ACCGTTTGCA TCGTCCCGGA GTGCTGTTTT CTGCGGGTTT GATTACAGGG GAGGCACTGA TGGGGATTTT GATTGCAGTA CCAATCGTGA TTTCTGGTCA TCCTGATGTG CTGGCATTAC CTGAGGCTTT CCAGTGCAAT CAGTGGTTTG GGTTGGCGGT ATTGGCGTTT GTGGGATGGC TGTTGTATCG GGTGAGTAAG CGTCGTGTGT AG
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Protein sequence | MNNDISPRQL TFRAVVLAVV LAVVLSAANA YLGLFAGLTI ATAIPAAVVS MGVLRVLGGS SILENNIVQT GASAGSSVAA GVIFTIPALV IMGYWPDFKY WWVLGIAGLG GLLGVLFSVP LRRSMIVEEP LPFPEGKAAA EVLKAGENPG PGLKILALSG GIGALVKLAA ASGLKLIPDT WSQAAYLGSS KVVGYIGTNL SPALLGVGYI VGLNVGIVVL SGSILSWHVA IPLYQQFFMG SDPELAQRLA TVTAAEAAFS VWGEKIRYLG VGTMLIGGVW TLFSLRKSLL RGIKSGFAAA RKGGGQVVSH TERDLPMTWM LVALAVFTLP LLLLYQSIVQ QWQVSVPMTM IMIVAGFLFV SVSGYLAGMV GSSNNPVSGI TISTILFASA VLVLLLGRNG LVPIGSGGAP LGAVAAIMIG AVVCCAAAVG GDNLQDLKAG YLVGATPWKQ QVMMGIGTFS CALIMAPVLN LLAHAYGIGP ATPQHPNALS APQATLMASV ARGLFGGQLP WTMIGAGVLI GAFIIGIDEW LKVRGARFRV PVLAAAIGIY LPLELMVPIF LGGVLSYGVE RAHKVRRGDE AERDRLHRPG VLFSAGLITG EALMGILIAV PIVISGHPDV LALPEAFQCN QWFGLAVLAF VGWLLYRVSK RRV
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