| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1371 |
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| Symbol | |
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| ID | 6202283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 1517603 |
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| End bp | 1519147 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641702890 |
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| Product | protease Do |
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| Protein accession | YP_001830063 |
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| Protein GI | 182681903 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.909738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTCAC GTATCCATAC ACGATGCTTC GGCCTACTCG CCATCACCTT GCCGTTAGCT
GCCTGTGGCG CGCAACACAA CAACAGCCCC ACTCCCACTG CACACTCCAC CCCCATTGTG
ACCCCCAGCA CCACCCCAGC ACCACAGCTC GTGGCTGGGT TGCCAGATTT CACCCAACTG
GTCGACCAAG TAGGGCCTGG TGTGGTCAAC ATTGAAACCG TCATTACCCG TAAGAAAGTC
GGCAAACGTC GCGGTATACC GCTTGACAAC GATATACCCG AGTTTTTCCG GCGTTTCTTT
GGCCCAGATT TCCAGATGCC GAACCAACCT CGTGGCGGCC AGGATGACGA GGGAGGTATC
GCTGGTCGGG GAATGGGCTC TGGCTTCATC ATTTCCAAAG ACGGCTACAT ACTCACCAAC
CATCACGTCA TCACTGGCGC AAGCGAGGTC ACAATCAAAT TGACTGATCG CCGCGAATTC
AAAGCAAAAG TCATCGGTAG CGACGAACAG TACGATGTTG CTTTACTCAA AATAGATGCA
AAAAATCTAC CCACCGTGCG TATCGGCGAC TCCAGTTCAC TTAAACCTGG TCAGTGGGTC
GTTGCGATCG GCTCCCCCTT CGGATTAGAT CACTCAGTCA CTGCAGGGAT AGTCAGCGCA
CTGGGACGCA GCACCAGTGA CGATCAACGC TATGTCCCAT TTATCCAAAC CGACGTACCC
ATTAACCAGG GAAATTCTGG TGGTCCATTG CTGAATACCC GAGGTGAAGT GATTGGTATC
AACTCGCAAA TATTTTCCGC CTCAGGCGGC TACATGGGTA TTAGCTTTGC CATTCCAATC
AATTTGGCAA TCAACGCTGC CGAACAAATC CGTAAAACAG GCAAAGTGCA ACGCAGTATG
CTCGGTGTTG AAATCGGCCC TATCGACGCA CTCAAAGCTC AAGGCCTAGG CTTACCGGAC
AGCCGAGGCG CACTGGTCAA TAACATTCCA CCCCACAGCC CGGCCGCCAA AGCAGGGATT
GAAGTCGGTG ACGTCATCCG CTCAGTGAAC GGCAAAGTAA TCAGTAGCTT CAGCGATCTG
CCTCCACTGA TCGGCATGAT GCCGCCAGGC ACCAAAGCCA CCCTGGGTAT TATCCGTGAC
GGCAAATCGC TTGAGATCGT CGTCACTCTT TCGGCACTCA ATCAGGATGC AACAGTCAGC
GAAGATGAAG ACGACACATC ACCTTCCAAA CCAGAAACCT CTGCCAATGT CGAACTGCTC
GGCCTTCAAG TCGAAAACCT GAGCGCTGCT GAGCGCGAAC GCCTGGCCTC ATCGCAAAAC
GCGAAGGGAG GAGTCCGTAT CACGGCAGTC ACAGCGCCGT GGGCACGCAA CGCCAACCCG
CCATTAGTGG AAGGTTTATT TATCCTAAGG ATCGGCCGCA CTCCGGTTAG CAATGTGGCA
GAACTGAACC GTGCCCTAGG AAATTATAAG AAGGGAGATG TCATCATGCT CCTGGTGACC
AACGGCCGTG GCACGTTCTA CAGTGCGTTG AAAGCAGGCG GCTAA
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| Protein sequence | MNSRIHTRCF GLLAITLPLA ACGAQHNNSP TPTAHSTPIV TPSTTPAPQL VAGLPDFTQL
VDQVGPGVVN IETVITRKKV GKRRGIPLDN DIPEFFRRFF GPDFQMPNQP RGGQDDEGGI
AGRGMGSGFI ISKDGYILTN HHVITGASEV TIKLTDRREF KAKVIGSDEQ YDVALLKIDA
KNLPTVRIGD SSSLKPGQWV VAIGSPFGLD HSVTAGIVSA LGRSTSDDQR YVPFIQTDVP
INQGNSGGPL LNTRGEVIGI NSQIFSASGG YMGISFAIPI NLAINAAEQI RKTGKVQRSM
LGVEIGPIDA LKAQGLGLPD SRGALVNNIP PHSPAAKAGI EVGDVIRSVN GKVISSFSDL
PPLIGMMPPG TKATLGIIRD GKSLEIVVTL SALNQDATVS EDEDDTSPSK PETSANVELL
GLQVENLSAA ERERLASSQN AKGGVRITAV TAPWARNANP PLVEGLFILR IGRTPVSNVA
ELNRALGNYK KGDVIMLLVT NGRGTFYSAL KAGG
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