Gene XfasM23_1370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_1370 
Symbol 
ID6202073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp1516780 
End bp1517505 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content53% 
IMG OID641702889 
Productanti sigma-E protein, RseA 
Protein accessionYP_001830062 
Protein GI182681902 
COG category[T] Signal transduction mechanisms 
COG ID[COG3073] Negative regulator of sigma E activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.145734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAACC ATCTGTCCGA AACTGCTGAC AAGTTCGAAC TGCACACCCG ACTGCAATTG 
TCCCAACTGA TTGATAGTGA ACTACCGATG GACGAAGCAC GCTTTCTTCT ACGTCGGTTG
CAACACAATG AAGAATTAGC CAACTGCCAG GAACGTTGGC AACTGTATGG TGACGTGCTG
CGTGGCGTTG CACTGGCTCC CGCCCCGACA GACTTTACGC TACGGGTACA AGCTGCAGTG
GCGGCGGAAG CAACACCTGT ACGCACTAAA CACCGCTGGC GCGGTGGGAC CGCGTTAATC
GCCTCCGTTG CCGCAATCAT CTTACTAACA CTACACGGGT GGCCACCGAT GGCACCGCCG
TTAACAGAAA CAGAAATGGT ATTTGCAACC ACCGCACAAC TACTTAAGCC TCCTGTATCG
CCAAAGATTG CTGCAATCTC CGAGTTGCAA CACGGAGACG TTGGCATAAC ACAACGGGGC
AAAACGACAC ACAACCAACA GGCTGCACCA GAACATACAC TCGCTACGAT TCCGGTAACA
CAAGACCCAG CTCGTCTGAA CCTATTCACA CATTACGACA CGATACAAAC CAAACCCTGG
CCGCGTGCTG TTCTCTCTGC TCAGGCACCG TTTAACGCAA ACCTGCCGGA CACCGCTGTA
CGTCATGCGT TCTATCCATT CGAACCACCA CTCCCAGAAT CGCAACCTAT GTCCTCACAG
GAGTAA
 
Protein sequence
MSNHLSETAD KFELHTRLQL SQLIDSELPM DEARFLLRRL QHNEELANCQ ERWQLYGDVL 
RGVALAPAPT DFTLRVQAAV AAEATPVRTK HRWRGGTALI ASVAAIILLT LHGWPPMAPP
LTETEMVFAT TAQLLKPPVS PKIAAISELQ HGDVGITQRG KTTHNQQAAP EHTLATIPVT
QDPARLNLFT HYDTIQTKPW PRAVLSAQAP FNANLPDTAV RHAFYPFEPP LPESQPMSSQ
E