Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1369 |
Symbol | |
ID | 6202257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 1516163 |
End bp | 1516783 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641702888 |
Product | RNA polymerase sigma factor RpoE |
Protein accession | YP_001830061 |
Protein GI | 182681901 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02939] RNA polymerase sigma factor RpoE |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0484883 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGAAA CAAAACAACC TCAGTCCCTA GATATCGAAT TGGTTCGGCG CGTGCAGTGC GGTGAATACG CTGCATTCGA TACCTTAGTA CGCAAATACC AACATCGAGT CATTGCCCTG ATCGGACGCT ACATCGCCGA TTGGAGTGAA TGTCAGGACG TAGCCCAGGA AACATTTGTA CGCGCCTATC GTGGGATCTG CAATTTTCGC GGCGACGCTC AGTTTTCGAC CTGGTTACAT CGTATCGCCG TGAATACCGC CAAGAACCAC CTCGCCGCAC GCAACCGTTC CCGGCTGAGC AATGAGGCCG AAATTGAAGA GGCTGAACAG TTTAATCACA GCTCGCACTT AAGTGACACC AACACACCAG AACGAGAACT CATGCGCCAG GAGTTGGAAC AAATCGTGAT GAGCGCGGTC CAAGCACTGC CTGAAGAATT TAGAACTGCC TTTACTCTGT GCGAGATGGA AGGGTTGAGC TACCAAGAGA TCGCACAACG GATGGATTGC CCAATCGGAA CCGTACGTTC ACGTATTTTC CGGGCGCGCG AAGCGATAGA CATAGAATTA CGACCTTTTC TAGAGATCAA CAACATTACC CGCAAACGAT ATCGTGTATG A
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Protein sequence | MAETKQPQSL DIELVRRVQC GEYAAFDTLV RKYQHRVIAL IGRYIADWSE CQDVAQETFV RAYRGICNFR GDAQFSTWLH RIAVNTAKNH LAARNRSRLS NEAEIEEAEQ FNHSSHLSDT NTPERELMRQ ELEQIVMSAV QALPEEFRTA FTLCEMEGLS YQEIAQRMDC PIGTVRSRIF RAREAIDIEL RPFLEINNIT RKRYRV
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