| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1366 |
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| Symbol | |
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| ID | 6202059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 1509115 |
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| End bp | 1511499 |
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| Gene Length | 2385 bp |
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| Protein Length | 794 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641702885 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_001830058 |
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| Protein GI | 182681898 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0369246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGTGC TTCCATCATT GTCGGCCTCC ATGTTTGGTC GTTTGCGCGA TGATCGTGCA
TTGACTTGGC TGCGCTGGAG TTGTGCTGGA CTGCTTTCGC TGCTTCTTCT GTTGGATGTG
CTTTGCCCAT TGCCATTACC GACCTCGCAC GATATGGCTT TGCTGGTGGT TGCTCGAGAT
GGTACTCCAT TGCGTGCCTT CCCTGATGCT GATGGTGTAT GGCGCTACCC GGCGCAGTTG
GGACAGGTGT CGCCGTTGTA TGTGCAGGCT CTGTTGACCT ATGAGGACCG TATGTTCTGG
CGCCATCCGG GGGTGAATCC TTGGGCGTTG TTACGTGCTG GGGGCCTGTG GCTGCGTTAT
GGTCATGTCG TTTCCGGTGG CTCGACGTTG ACAATGCAGG CGGCACGGAT TCTTGAGCCG
CATGGCCGTA CTCCTTGGGG CAAACTCAAG CAGTTGTTGC GTGCAGTACA GTTAGAAGTC
CATTTGAGTA AGCGCCAGAT TTTGCAGTTG TATTTGGAAC GTGCCCCTTA CGGAGGGACG
ATCCAGGGCG TTGAGGCGGC AAGCTGGGCT TATCTTGGCA AGTCGGCGGC ACGCTTATCG
CATGCTGAGG CGGCGTTGCT GGCGGTATTG CCGCAGTCGC CAAGCCGGTT GCGTCCGGAC
CGTAATCCGC AGTTGGCACG GCAAGCACGC GATAAGGTGC TGGCACGCAT GGCAGTGCTT
GGTGTCTGGT CTGATGAAGA GGTGAAAGAT GCGCGGCTGG AGCCGGTGGT TGCACGTGCA
TTGCAGCCAC CCATGTACGC GGCGTTGTTG GCGCAGCGTC TGCGTGTGCA ACGGCCACAT
GCTGCACGCA TTGTGACCAC GTTGGACATT GATTTGCAGC GTACTCTTGA GGAAAGAGTG
AGTACCTATT TCTCACCGTT ACCTGAGCGC ACTTCTGCTG CGGTGCTGGT GATGGATAAT
CAAAGCCTGG AAGCACGTGC CTACGTTGGT TCGGTGACAT TCGGTGATGC CAAGCGGTTG
GGTCACGTGG ATATGGTGCG GGCTTGGCGT TCGCCGGGTT CCACACTTAA ACCGTTTCTT
TATGGAATGG CGTTGGATCA GGGCTTGATT CATTCTGAGA GTTTGTTGGT CGATGCGCCA
CAGCATTTTG GTGATTATCG TCCGGGTAAT TTCGATGCTG CGTTCACTGG CCCTATTGGT
GCGTCCAGTG CATTGCGACA GTCGTTGAAC GTGCCTGCAG TCGATTTGTT GGAACGGATT
GGGCCGGCTC GGTTTGCGAC GCGTCTGGCG CATGCAGGGG TGCAGTTGCG TTTCCCACGC
GGTGCCACCC CGAATTTGGC GTTGATCCTC GGGGGTGCAG GGGCACAGTT GCAGGAGCTG
GTGGGTGCCT TCTCGGTGTT CAACCGCGGT GGCGTGGCAG GACGGGTGCG TTATACCCCG
GAGGATCCGC GTATTGAGCG TCGTTTGATC TCCCCTGGTG CGGCTTGGAT TGTGCGCGAG
ATTCTTGCTG CTAACCCGCG CCCTGGGTAT GGCAGGGGCA CGTTCGATAC TGCGATGCGT
CCGTCCGTGG CTTGGAAGAC TGGTACCAGC TATGGCTTCC GTGATGCTTG GGCGCTGGGG
AGTACCCGCC GCTACACAGT GGGTGTTTGG GTTGGGCGTC CGGATGGTAC CCCGCTGCCG
GGTCAGTATG GTGCGATTAC GGCATTACCG TTGTTGTTTG ATGTGATTGA TGTGTTACCA
CGCGCGCCTG GTGATGCTGT GCCGGAGCCG ATGCCAGCCA GTGTGGAGCA GGTTGATATC
TGTTGGCCGC TGGGTTTTGC TGCTGCTAGC ACGCCGCCGG AATTGTGCCG ACGGCGCTAC
AGTGCCTACG TATTGGATGG GGTGGTGCCG CCGACCTTCG CTGAGCGTGA TGCGAAATTG
TGGCGTAGCG GTTTGGAACG ATTCCAGGTC GATGTGCGTA GTGGTTTGCG TGTTAGGCCT
GATTGTCGTC TGCCGCATCT GATCAGGGAG CAGCAGATTG CACGTTGGCC GACGTTGGTG
ATCCCATGGC TTGATGCTGT GGAGCGTCGT GCGACGCATC TGCCTCGGCT GGCCTCAGAC
TGTTCTGAGG ATGATCGTGC TGATGCTGGG GTGCTGTACA TTGATGGTCT CGTTGAAGGT
GCCACATTGC AGCGTCCACC TGGTAGTACC AAGCCGGTAC ATCTGCAGTT GCGTGCATTG
GGCAGTGAAA CACGGATCGA CTGGCTCTTG GATGGGCGCT GGATTGCTCA AACTGTGGGG
GGACAGACCT TTCAGCGTGA TTTCCCAGAA CCAGGGACGT ATATCTTGAC TGCGTTGGCT
GAGGATGGTG CTTGGAACAG GATGCAGTTC CGCGTTTTAC GTTAA
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| Protein sequence | MFVLPSLSAS MFGRLRDDRA LTWLRWSCAG LLSLLLLLDV LCPLPLPTSH DMALLVVARD
GTPLRAFPDA DGVWRYPAQL GQVSPLYVQA LLTYEDRMFW RHPGVNPWAL LRAGGLWLRY
GHVVSGGSTL TMQAARILEP HGRTPWGKLK QLLRAVQLEV HLSKRQILQL YLERAPYGGT
IQGVEAASWA YLGKSAARLS HAEAALLAVL PQSPSRLRPD RNPQLARQAR DKVLARMAVL
GVWSDEEVKD ARLEPVVARA LQPPMYAALL AQRLRVQRPH AARIVTTLDI DLQRTLEERV
STYFSPLPER TSAAVLVMDN QSLEARAYVG SVTFGDAKRL GHVDMVRAWR SPGSTLKPFL
YGMALDQGLI HSESLLVDAP QHFGDYRPGN FDAAFTGPIG ASSALRQSLN VPAVDLLERI
GPARFATRLA HAGVQLRFPR GATPNLALIL GGAGAQLQEL VGAFSVFNRG GVAGRVRYTP
EDPRIERRLI SPGAAWIVRE ILAANPRPGY GRGTFDTAMR PSVAWKTGTS YGFRDAWALG
STRRYTVGVW VGRPDGTPLP GQYGAITALP LLFDVIDVLP RAPGDAVPEP MPASVEQVDI
CWPLGFAAAS TPPELCRRRY SAYVLDGVVP PTFAERDAKL WRSGLERFQV DVRSGLRVRP
DCRLPHLIRE QQIARWPTLV IPWLDAVERR ATHLPRLASD CSEDDRADAG VLYIDGLVEG
ATLQRPPGST KPVHLQLRAL GSETRIDWLL DGRWIAQTVG GQTFQRDFPE PGTYILTALA
EDGAWNRMQF RVLR
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