Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1354 |
Symbol | |
ID | 6202064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 1492368 |
End bp | 1492706 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641702873 |
Product | TrpR like protein, YerC/YecD |
Protein accession | YP_001830046 |
Protein GI | 182681886 |
COG category | [S] Function unknown |
COG ID | [COG4496] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01321] trp operon repressor, proteobacterial [TIGR02531] TrpR-related protein YerC/YecD |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAAC GTCCAATCCC CCGTCCCCAA ACCGATACCA CCGCTGCATT ACAGGCATTA GCCGACGCCC TTGCCTGCCT TAGAAACAGC GCCACAGTCC TTGCCTTTCT CCGTGACCTG TGTACCCCAG CCGAGTTGGA AGCGCTGGCC GACCGCTGGC GCGTCGTGCC CTTGCTGCTC CAAGGCCGGC CCTACCGTGA CATCCACGAC CACACCGGCA TCAGCGTCAC CACCATCGGC CGTGTCGCGC GTTGCCTTGA ACACGGTACC GGCGGCTATG CAGCGGTATT GCAGGCCCAG GCCATGCCTC CTGCCAGCTC CATTGAGAAA CCACAATGA
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Protein sequence | MKQRPIPRPQ TDTTAALQAL ADALACLRNS ATVLAFLRDL CTPAELEALA DRWRVVPLLL QGRPYRDIHD HTGISVTTIG RVARCLEHGT GGYAAVLQAQ AMPPASSIEK PQ
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