Gene XfasM23_1354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_1354 
Symbol 
ID6202064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp1492368 
End bp1492706 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content62% 
IMG OID641702873 
ProductTrpR like protein, YerC/YecD 
Protein accessionYP_001830046 
Protein GI182681886 
COG category[S] Function unknown 
COG ID[COG4496] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01321] trp operon repressor, proteobacterial
[TIGR02531] TrpR-related protein YerC/YecD 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAC GTCCAATCCC CCGTCCCCAA ACCGATACCA CCGCTGCATT ACAGGCATTA 
GCCGACGCCC TTGCCTGCCT TAGAAACAGC GCCACAGTCC TTGCCTTTCT CCGTGACCTG
TGTACCCCAG CCGAGTTGGA AGCGCTGGCC GACCGCTGGC GCGTCGTGCC CTTGCTGCTC
CAAGGCCGGC CCTACCGTGA CATCCACGAC CACACCGGCA TCAGCGTCAC CACCATCGGC
CGTGTCGCGC GTTGCCTTGA ACACGGTACC GGCGGCTATG CAGCGGTATT GCAGGCCCAG
GCCATGCCTC CTGCCAGCTC CATTGAGAAA CCACAATGA
 
Protein sequence
MKQRPIPRPQ TDTTAALQAL ADALACLRNS ATVLAFLRDL CTPAELEALA DRWRVVPLLL 
QGRPYRDIHD HTGISVTTIG RVARCLEHGT GGYAAVLQAQ AMPPASSIEK PQ