| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1338 |
|---|
| Symbol | |
|---|
| ID | 6202197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 1475909 |
|---|
| End bp | 1476475 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641702857 |
|---|
| Product | elongation factor P |
|---|
| Protein accession | YP_001830030 |
|---|
| Protein GI | 182681870 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
|---|
| TIGRFAM ID | [TIGR00038] translation elongation factor P
[TIGR02178] elongation factor P-like protein YeiP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0000294527 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCCA GTGAGATGAA AAAGGGCAGC ATTGTTGAGT ACAGCAATGG GACGTATCAA
ATCAGGGACA TTCAGCGTAG TTCTCCGCAG GGACGGGGCG GCAATGTGCG GTTCCGCTTT
GTGATGTATA GCGTGCCGGG CGGTAGTAAG TTGGAGGCGA GTTTTGATGC CGATGAGATG
TTGACTGCGG TGGAGTTGCT GCGTCGTGAG GCCAGTTTTT CGTACAAGGA CGGTGAGGCG
TTTGTCTTTC TGGATGAGGA GGATTACACG TTGTATACGT TGGATGCGGA GGCCATCGGG
GATAACGCTG GGTATATCAG TGAGGGGCTA TCTGGGTGTT ATGTGCAGCT GATTGATGCG
TCGCCGGTGG CGTTGCAGTT GCCGCAACAT GTGGTTTTGG AGGTGGTCGA TACGCCTCCG
GAGTTGAAGG GGGGGACGGC GACGAAACGA CCCAAACCGG CCAAGCTCAT CACTGGGATT
GAGGTGATGG TGCCGGAGTA CATAACGACT GGGGAACGTA TTTTGGTCAA TACGACGACT
GGGGCGTTTG GTGGGCGGGC GAGCTGA
|
|---|
| Protein sequence | MKASEMKKGS IVEYSNGTYQ IRDIQRSSPQ GRGGNVRFRF VMYSVPGGSK LEASFDADEM
LTAVELLRRE ASFSYKDGEA FVFLDEEDYT LYTLDAEAIG DNAGYISEGL SGCYVQLIDA
SPVALQLPQH VVLEVVDTPP ELKGGTATKR PKPAKLITGI EVMVPEYITT GERILVNTTT
GAFGGRAS
|
|---|
| |