| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1317 |
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| Symbol | |
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| ID | 6202156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 1450683 |
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| End bp | 1451291 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641702839 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001830012 |
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| Protein GI | 182681852 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.175415 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTACTT TAATTTTGAT TGCTATGAAT GCGGTGGTGT CCTGGTTGGC TTTCAATAAT
AGTCGTTTGC TTGATCGGTT GGTTTTTTGG CCTCCGGCGA TTGATCGTGA TCACCAATAT
GATCGGTTGA TTACGTATGG TTTTGTACAT GCCGATATTT CGCATTTATT GTTCAATATG
GTGACGTTAT ATTTTTTTGG CAGCATGATT GAAGCCGTCA TGGGCGAACT TACTGGGAGT
CTATTGACTT ATCCTTTGTT TTATTTAGGG GCGTTGTTGG TATCGATTTT GCCTAGTTAT
ATTAAGAACC AGAAAAATCC AAAGTATCTG AGTCTTGGTG CTTCAGGCGC TGTGTCGGCT
GTGTTGTTCG CCGCGGTATT GTTGCAGCCT TGGGCCTTAA TTGTTGTGCT GTTTATTCCT
GCGCCTGCGA TTTTTTATGC TGTTTTTTAT GTTGGGTATA GTATTTGGAT GGGGCGTCGC
GGTGATGATG GAATTAATCA TAGTGCACAT CTTTCCGGTG CTGCTTTTGG TGTGGTGTTT
ATGTTGTGTA TGGAGCCGCA GTTGTTGCAG GTATTTTTGA TGCAATTAAC CATGCCACGT
TTTGGTTGA
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| Protein sequence | MITLILIAMN AVVSWLAFNN SRLLDRLVFW PPAIDRDHQY DRLITYGFVH ADISHLLFNM
VTLYFFGSMI EAVMGELTGS LLTYPLFYLG ALLVSILPSY IKNQKNPKYL SLGASGAVSA
VLFAAVLLQP WALIVVLFIP APAIFYAVFY VGYSIWMGRR GDDGINHSAH LSGAAFGVVF
MLCMEPQLLQ VFLMQLTMPR FG
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