| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1292 |
|---|
| Symbol | |
|---|
| ID | 6202123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 1423852 |
|---|
| End bp | 1424601 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641702813 |
|---|
| Product | 3-deoxy-D-manno-octulosonic-acid kinase |
|---|
| Protein accession | YP_001829987 |
|---|
| Protein GI | 182681827 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0478] RIO-like serine/threonine protein kinase fused to N-terminal HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGCAT TTGACGCCAA CGAAATCCTG ACGCCATTCT GCGAGGGTCA CAGGGAAGGA
GCTATTTTGT TCGATTGCCA GCGTATGCGG CAAGTCGAGT ATGGTCTATT TGTGCCTGCT
TGGTGGGGGG AGCGAGCCCA TCCGATATCT GAGGGAGGAC GTGGTAGTGC TTGGTTCGTG
GAGGCGTCGT TTGGGAATGC GGTATTGCGT CAGTACCGAC GTGGCGGAAT GATCGCTATG
CTTAATCGTG ATCGTTACTT CTGGTGTGGT GGTCACCGTA CTCGAAGTGT CCTTGAGTTC
CGCTTGATGC GTGAGTTGAT CTCGCGAGGG TTGCCGGTTC CAACTCCCTT GGCTGCTTGT
TACGTGCGGC ATGGTGTGCA ATATCGAGCA GCGATCTTGA TGGAGCGACT GGAGGGAGTG
TCTTCGCTTG CTATGTGCGT ACGTGGGAAC AGCAAAGAGA TACATTGGGA GCAGATTGGG
CGGATGATTT CGCGCTTTCA TCGCGAGGGG CTGGACCATG CGGATCTTAA TGCTCACAAC
ATTCTGTTAG ACCAAGCTGG CCAGTGCTGG TTGATTGATT TCGATCGTGG TGCGCTACGT
ATTCCTGCGA CCAAGTGGCG AGAGCACAAT TTAGCCCGCT TACTGCGCTC ATTGCTGAAA
ATACGGGGGG AACGTAGTGT GGATGCAGTG TATAGGGACT TTGAGCGTTT GTGTCGTGCT
TATGACTTGG CTTGGGGTCG GGGGTGTTGA
|
|---|
| Protein sequence | MVAFDANEIL TPFCEGHREG AILFDCQRMR QVEYGLFVPA WWGERAHPIS EGGRGSAWFV
EASFGNAVLR QYRRGGMIAM LNRDRYFWCG GHRTRSVLEF RLMRELISRG LPVPTPLAAC
YVRHGVQYRA AILMERLEGV SSLAMCVRGN SKEIHWEQIG RMISRFHREG LDHADLNAHN
ILLDQAGQCW LIDFDRGALR IPATKWREHN LARLLRSLLK IRGERSVDAV YRDFERLCRA
YDLAWGRGC
|
|---|
| |