| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1247 |
|---|
| Symbol | |
|---|
| ID | 6201973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 1383351 |
|---|
| End bp | 1384226 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641702772 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001829946 |
|---|
| Protein GI | 182681786 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.345861 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCA CAGAACACGA TCCGATGATC CTCGCCAAGG GATTGCTTAA GACCTATAAA
AATACCGTTG CTCTGGCTGG TCTGTCGTTT CGCTTTGGAC CTGGTCGCAT CGTTGGCTTG
ATTGGCCCTA ATGGCGCCGG TAAAACCACA GCACTCAAAG CAATCCTGGG CCTGACCAGC
TACCAAGGTC AGTTGCAAGT GCTCGGCATG GACCCGTACC GGCAACGCAA CGCACTGATG
AACGATGTCT GCTTCATCGC CGATGTGGCG CTCCTGCCAC GCTGGCTACG GGTCAATGAG
GCGATTGATT TCGTCTCTGG GGTACATCCA CGCTTTGACC GTACTAAGTG CGAAGGTTTC
TTAGAACGCA CTCAACTACC CCGCGGAGCA CGGGTGCGCG AGCTATCCAA GGGAATGATT
GTGCAATTGC ATCTGGCGCT GGTAATGGCC ATTGACGCAC GCCTGCTGGT CCTGGACGAA
CCAACCTTGG GCCTGGACAT TCTTTACCGC AAACAATTCT ACAGGCACCT GCAGGAATAC
TACTTTGACG AACAAAGAAC CATCCTGATC ACCACCCACC AGATCGAAGA GATCGAACAG
ATCCTCACCG ATGTGATGTT TATCCGCGAC GGCCACATCG TGCTCAATAC AGACGTACAA
AACTTAGCCA AGCGCTACAC CGAGGTGTTA GTGGATACCG ACAAACTCGA CAGCGCACGC
GCACTCGGAC CCATCGACGA ACATAAGCGG CCATCAAGTC ACACCGTCAT GTTGTTTGAT
GGCATCCCCA AAGATCAGCT AACACCCCTC GGCACCACCA GTACACCAAG CTTGGCAGAC
TTGTTTGTGG CGGTCATGAA CGGAACCTAC GCATGA
|
|---|
| Protein sequence | MNTTEHDPMI LAKGLLKTYK NTVALAGLSF RFGPGRIVGL IGPNGAGKTT ALKAILGLTS
YQGQLQVLGM DPYRQRNALM NDVCFIADVA LLPRWLRVNE AIDFVSGVHP RFDRTKCEGF
LERTQLPRGA RVRELSKGMI VQLHLALVMA IDARLLVLDE PTLGLDILYR KQFYRHLQEY
YFDEQRTILI TTHQIEEIEQ ILTDVMFIRD GHIVLNTDVQ NLAKRYTEVL VDTDKLDSAR
ALGPIDEHKR PSSHTVMLFD GIPKDQLTPL GTTSTPSLAD LFVAVMNGTY A
|
|---|
| |