| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1239 |
|---|
| Symbol | |
|---|
| ID | 6201941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 1373751 |
|---|
| End bp | 1374956 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641702764 |
|---|
| Product | N-acylglucosamine 2-epimerase |
|---|
| Protein accession | YP_001829938 |
|---|
| Protein GI | 182681778 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2942] N-acyl-D-glucosamine 2-epimerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCCAT TACCTGCAAC TCCTGTTCCG GATTTCCGTT CAGCGGATTT CCTGCGTACA
CATATCAGCG ACACCATGGC GTTTTATCAT CCTCGCTGTA TCGATTCGGC GGGTGGTTTT
TTCCACTATT TCCGCGACGA TGGCAGTATC TACAATGCTA CTCATCGCCA TTTGGTCAGT
AGTACGCGTT TCGTTTTCAA TTACGCGATG GCTTATCTGC AATTTGGCAC CGCAGAGTAT
CTAGATGCCG TTCATCATGG TTTGAGTTAT GTGCGCGATG TGCATCGCAA TCCAGCCACT
GGTGGTTATG CTTGGACGCT TTGTGATGAT CGTGTTGAAG ATGATACCAA TCATTGCTAC
GGGCTAGCGT TCGTGATGTT GGCGTATTCA TGCGGGCTGA AAGTGGGGAT TAAGCAGGCG
CGGGAATGGA TGGATGAAAC GTGGTGCTTG CTGGAACGGC ATTTTTGGGA TGCTGAGTAT
GGCCTGTACA AGGATGAGGC CGATGCGCAG TGGAATTTCA CGCGCTATCG CGGACAGAAT
GCCAACATGC ATATGTGCGA GGCGATGTTG GCGGCCTATG AGGCCAGCGG TGAGCAGCGT
TATTTGGAGC GTGCGCTAGT GCTCGCTGAT CGTATCACCC GTCGTCAGGC CGCTAAAGCA
GATGGCTTGG TGTGGGAGCA TTACGATATG CGCTGGGAAG TCGATTGGGA TTATAACCGT
GACAATCCCA AGCATTTATT CCGACCCTGG GGCTTCCAGC CAGGACACCA GACCGAATGG
GCTAAGTTGT TGTTGATTTT GGATCGTTAT ATTGAGGTTG AATGGTTGGT TCCGGTTGCG
CGTTCCTTAT TCGATGTTGC CGTAGCGCGT TCGTGGGATG CTGTACGTGG AGGCTTATGC
TATGGGTTTG CTCCAGACGG TACGATCTGC GATGACGATA AGTATTTTTG GGTGCAGGCT
GAGTCGTTAG CTGCTGCTGC GTTGCTGGCT ACACGTAGCG GTGACGAGCG TTATTGGCAG
TGGTACGACA GGTTGTGGGC GTATGCTTGG CAGCACATGG TTGATCATCG CTACGGTGCT
TGGTACCGCC TCCTTGATGG TGACAATCGC AAGTACAACG ATGAGAAGAG TCCGGCTGGC
AAGACCGATT ATCACACTAT GGGGGCTTGT CATGAGGTGC TCAATGTTGT CTGGACGAAG
TCGTAG
|
|---|
| Protein sequence | MTPLPATPVP DFRSADFLRT HISDTMAFYH PRCIDSAGGF FHYFRDDGSI YNATHRHLVS
STRFVFNYAM AYLQFGTAEY LDAVHHGLSY VRDVHRNPAT GGYAWTLCDD RVEDDTNHCY
GLAFVMLAYS CGLKVGIKQA REWMDETWCL LERHFWDAEY GLYKDEADAQ WNFTRYRGQN
ANMHMCEAML AAYEASGEQR YLERALVLAD RITRRQAAKA DGLVWEHYDM RWEVDWDYNR
DNPKHLFRPW GFQPGHQTEW AKLLLILDRY IEVEWLVPVA RSLFDVAVAR SWDAVRGGLC
YGFAPDGTIC DDDKYFWVQA ESLAAAALLA TRSGDERYWQ WYDRLWAYAW QHMVDHRYGA
WYRLLDGDNR KYNDEKSPAG KTDYHTMGAC HEVLNVVWTK S
|
|---|
| |