| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1223 |
|---|
| Symbol | |
|---|
| ID | 6203144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 1356636 |
|---|
| End bp | 1357604 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641702751 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001829925 |
|---|
| Protein GI | 182681765 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2378] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTTT ATCAACGTAT CGGTGTCATG CACTGTTTAT TGAAGTCGGT GTCTTGTCCA
ATTGGCGTGT TGCGCTTTCA GGATGAATTG GGTTGCTCTG CTGAGACGAT CTATCATGAT
GTGGCCTTCA TGCGTAATGT GCTAATGGCC CCGATTGAGG GGGATGGAGA GACGGGGTTT
TTTTATCTCT TGAGTGAGGG TAACCAGTTT GAGTTACCGG GGGTATGGTT CAATTCGGAG
GAGTTGTACG CGTTGCTGGC GATGCAACAA CAGTTGGTAT CTGCATCTAT GGATGGTCTT
GTATCTTCCA TGCTGTTACC GCTGCAACAG CACATTGAAA ATTTGTTGGC TGCTCAGCCT
GGTATGCCAC CTTGGCAAGT GGGGCGTGTA CGCGTGATCT CACACCGAAA TCGTAAGTTG
AACCAAGTAA GTTTCCGTAT CGTTGCTTCT GCGGTGCTTG AGCGTAAGCA GCTTGGCTTT
TACTATCGTG CGCGTTCTAC TGACGAAGCA AGTAATCGTG TTGTCTCGCC ACAATGCATG
ACCCACTACC GCGGTAATTG GTACCTCGAC GCTTGGGATC ATGGTCGTCA GGGAGTACGC
AGTTTCGCTG TAGACAGGAT CTATCGTGCT CGGATTATTG ACGTGCAGGC ACATGATCTA
CCCGATAGCG ATCTAGAGGA GCAGTCATCG GGTAGTTACG GTATTTTCTC AGGGTTACCC
AAAGGCTGGG CGACAATCGT GTTTAGCTCC AAAGCGGCAC GTTGGGTCGC TGACGAATAC
TGGCATGTTA AACAGCGGGG GCGTTTTCTT GTCGATGGTC GCTATGAATT GCAGGTGCCG
TACAGCATCT CGCGCGAGCT GTTGATGGAC GTGTTGCATT ATGGTTCGGA TGCAGAGATT
GTTGAGCCAC CTGCACTACG TGAGCAAGCA AAGGCCTTAT TGTCGCTGGC GTTGAGCAAC
TATGAGTGA
|
|---|
| Protein sequence | MDLYQRIGVM HCLLKSVSCP IGVLRFQDEL GCSAETIYHD VAFMRNVLMA PIEGDGETGF
FYLLSEGNQF ELPGVWFNSE ELYALLAMQQ QLVSASMDGL VSSMLLPLQQ HIENLLAAQP
GMPPWQVGRV RVISHRNRKL NQVSFRIVAS AVLERKQLGF YYRARSTDEA SNRVVSPQCM
THYRGNWYLD AWDHGRQGVR SFAVDRIYRA RIIDVQAHDL PDSDLEEQSS GSYGIFSGLP
KGWATIVFSS KAARWVADEY WHVKQRGRFL VDGRYELQVP YSISRELLMD VLHYGSDAEI
VEPPALREQA KALLSLALSN YE
|
|---|
| |