| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1212 |
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| Symbol | |
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| ID | 6202516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 1340063 |
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| End bp | 1341082 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641702740 |
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| Product | integrase family protein |
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| Protein accession | YP_001829914 |
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| Protein GI | 182681754 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.225164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACGTA AGCCAATCAA AGCAGGCGCA ATTCCGAGGT TTCGCGTGCG CCCTCAGAAG
TCCGGCGTGG TGTATTACTA CTACGATCAT GGCGGCAAGC CACGCAAAGA GACGCCACTA
GGACGCGACT ACGGGTTAGC CATCAAGCGG TGGGCTGAGC TGGAGCATGC GCAGATCACT
CCTGCGATTG CGGTGACGTT CCGCCATGTG GCCGAGCGTT ACCGCGCTGA GGTGATCCCA
ACAAAGGCGT ATAACACCCA ACGCATGCAC CACGTATATT TAAACTATCT GTTGCAGTTT
TTCGACGATC CCCCCGCGCC GTTTGAGTCA ATTAAACCTG TGAATATCCG CCAGTATCTA
GATTGGCGGC CTTTTAAGGT AAGCGCTAAT CGCGAAGTAG CATTATTTTC GCATCTTTGG
AATTGGGCGC GGAGTAAGGG AATTACTGAT CTTCCTAACC CTTGTGGGGG TATCCGGCGT
AATAAGGAGC GGGGGCGCGA CGTGTATATA GATGATACGA CGTACCGCGC TGTGTACCAG
GCAGCGGACC AAACGCTCAG GGATGCGATG GACCTCGCCT ATCTGACGGG GCAGCGTGTG
AGTGATGTTG TGTCTATGGA TGAGCGCCAT ATTGTTAATG GCGCTTTGGA GATTTGCCAA
GCTAAAACGG GAGTGAAATT GGCGATTGCG ATTACGGGTG AATTGGCAGT TTTAATAAAG
CGTATTTTTG ATCGCAAGCG GGGGATGAAG CTGCGTAGTA CACGTTTGAT TGTGGATGAA
AAAGGCTTGG GGTTGAATTG GAAAAAATTA GCTTACAGGT TTAGGAAAGT ACGCGCTGCC
GCAGGGATCG CCAAGGAGGT ATTTCAATTC CGCGATCTAC GCGCCAAAGC GGCGACCGAT
AAGGCAGATT TGGCGGGCGA TATACGCCAA GCGCAAGCAC AGTTGGGCCA TACCTCGGTG
GTGATGACAG AGCACTACGT ACGTAAACGC AAAGGAGCGA AGGTGACGCC TACGCGGTGA
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| Protein sequence | MGRKPIKAGA IPRFRVRPQK SGVVYYYYDH GGKPRKETPL GRDYGLAIKR WAELEHAQIT
PAIAVTFRHV AERYRAEVIP TKAYNTQRMH HVYLNYLLQF FDDPPAPFES IKPVNIRQYL
DWRPFKVSAN REVALFSHLW NWARSKGITD LPNPCGGIRR NKERGRDVYI DDTTYRAVYQ
AADQTLRDAM DLAYLTGQRV SDVVSMDERH IVNGALEICQ AKTGVKLAIA ITGELAVLIK
RIFDRKRGMK LRSTRLIVDE KGLGLNWKKL AYRFRKVRAA AGIAKEVFQF RDLRAKAATD
KADLAGDIRQ AQAQLGHTSV VMTEHYVRKR KGAKVTPTR
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