Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1209 |
Symbol | |
ID | 6203195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 1338244 |
End bp | 1339662 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641702737 |
Product | SNF2-related protein |
Protein accession | YP_001829911 |
Protein GI | 182681751 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.367756 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCTGC GCCCCTACCA ACACACCATC GTTGATTTCA TCCTGACGCA CCCACGCTGC AATCTGTTTG TGCCCATGGG TTTGGGGAAG ACAGTAGCCA CGCTGACGGC GTTAGATGTG CTTCTGGTGG TGGAAGACAT TGCGCCTATT TTGGTGATTG CTCCGCTGCG CGTTGCGGCC ACGACATGGC CGGATGAGGT GGCCAAGTTC CCCCATTTGC GCCATCTGCG GGTGTCCGTG GTCGTGGGTA GTGCGGCAGC ACGTCGCCAC GCCTTGGAGC AGGAGGCGGA TATCTACTGC ATTAATTACG ACACTCTGAA ATGGTTAGTG GAGTTTTACA AGGACCGTTG GCCGTTCCGT ATGGTGGTCG CCGATGAGTG CTCCAAGTTG AAAGGGTTCC GGCTGCGGCA AGGAACACGG CGCGCCCGCG CACTGGCCAC GCATGTGCAT ACCAAGGTGG AGCGCTACGT TGGGTTGACC GGCACGCCCG CGCCCAATGG GCTACAGGAC CTGTGGGCGC TGATGTGGAT GGTGGATCGT GGGGCACGGC TTGGGACGCA TTTTAAAGCG TTTATCGATC GCTGGTTCCG TGCGATGCAG ATCGGCAGTG ATCCGCATGC GGTGCGCTTT GTGCCCACGC CACATGCATC TCAAGAGATT CAAGACAAGA TACGCGATAT CTGTTTATCA CTTGATCCAC ATGCGTACTT CGATTTATGC CAGCCGATTG TCAATACGAT TCGCGTTGCG TTGCCAGCAC ATGCGCAACG TCTGTACAAG GCGATGGAAC AAGATATGTT CATCGCCTTG GAATGCGGTG CTGAAGTAGA AGCCTTTAAC GCCGCCAGCA AGACAATTAA ATGCCTGCAA CTGGCCAATG GTGCGCTGTA CACCGATGAC ACACGTCAGG CCTGGGAAGT CGTGCACGAT GCGAAATTAG AGGCGCTGCA CGACATTATC GAAGAAGCCG CCGGTATGCC GGTGTTGGTG GCGTATCACT TTAAAAGTGA TGTCGCACGG TTGCAGCGTG CCTTCCCCAA GGGGCGTGCT TTGGACAAAC ACCCCGACAC GATCCGCGAT TGGAATGCGG GGAACATTCC CGTGCTATTT GCCCATCCGG CCAGTGCCGG TCATGGCTTA AATCTGCAAG ACGGCGGAAA TATTTTGGCC TTCTTTGGCC ACTGGTGGGA CCTGGAGCAG TACCAGCAGA TCATCGAACG CATTGGGCCG ACACGTCAGG CGCAAGCCGG ACATACGCGG CCTGTATTTA TTCACCACAT CGTGGCGGCG GGCACGGTGG ATGAATTGGT GATGGCCCGC CGTGAATCTA AACGCGAAGT ACAGGACCTG CTGCTGGAAG CGGTGAAACG CAGAGAAACA GGCAAACCAC TCACATCACA AGGAGCCATA GCGTTATGA
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Protein sequence | MNLRPYQHTI VDFILTHPRC NLFVPMGLGK TVATLTALDV LLVVEDIAPI LVIAPLRVAA TTWPDEVAKF PHLRHLRVSV VVGSAAARRH ALEQEADIYC INYDTLKWLV EFYKDRWPFR MVVADECSKL KGFRLRQGTR RARALATHVH TKVERYVGLT GTPAPNGLQD LWALMWMVDR GARLGTHFKA FIDRWFRAMQ IGSDPHAVRF VPTPHASQEI QDKIRDICLS LDPHAYFDLC QPIVNTIRVA LPAHAQRLYK AMEQDMFIAL ECGAEVEAFN AASKTIKCLQ LANGALYTDD TRQAWEVVHD AKLEALHDII EEAAGMPVLV AYHFKSDVAR LQRAFPKGRA LDKHPDTIRD WNAGNIPVLF AHPASAGHGL NLQDGGNILA FFGHWWDLEQ YQQIIERIGP TRQAQAGHTR PVFIHHIVAA GTVDELVMAR RESKREVQDL LLEAVKRRET GKPLTSQGAI AL
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