Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1178 |
Symbol | |
ID | 6204066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 1318221 |
End bp | 1318715 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641702706 |
Product | lysozyme |
Protein accession | YP_001829880 |
Protein GI | 182681720 |
COG category | [R] General function prediction only |
COG ID | [COG3772] Phage-related lysozyme (muraminidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGACCA TTGGTGAAGA AGGCATTGCA CTGATTAAGT TTTTTGAGGG TTGCAAGCTG AGCTCGTATA CCTGTCCTGG GGGTGTGTTG ACGATTGGCT ATGGTGAGAC GGGCAAGCAC GTTACGCCTG ATATGTGTCT TGCCAATGAG CAGGAAGCGG ATGCGCGGTT ACGTGCTCGA TTGGCCAAGG AGTTTGAACC GGCGGTGCGG CGTTATGTGC GTGTGCCACT CAAGCAACAT CAATTTGATG CGTTGGTATC GCTGAGCTTC AACATTGGTG CGGGCGCGTT CCACCGCTCG ACGCTGTTAC GCAAGCTTAA TGCCGGTGAT ATTGCTGGTG CGGCGCAGCA GTTTCATGTG TGGAAATGGG CGGGCGGTCG TGTGCAGTCT GGCTTAATCA TCAGGCGTGC CGCCGAACGT GCATTGTTTG AAGGCAGTGA CTGGCGTGCT GAAGAGAAGC AACGGCGTGC CGCTTTAAAG GGTCGCCGTG ATTGA
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Protein sequence | MQTIGEEGIA LIKFFEGCKL SSYTCPGGVL TIGYGETGKH VTPDMCLANE QEADARLRAR LAKEFEPAVR RYVRVPLKQH QFDALVSLSF NIGAGAFHRS TLLRKLNAGD IAGAAQQFHV WKWAGGRVQS GLIIRRAAER ALFEGSDWRA EEKQRRAALK GRRD
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