Gene XfasM23_1173 details

Gene Information

• Locus tag: XfasM23_1173
• ID: 6204053
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M23
• Kingdom: Bacteria
• Replicon accession: NC_010577
• Strand: -
• Start bp: 1314571
• End bp: 1316523
• Gene Length: 1953 bp
• Protein Length: 650 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 641702701
• Product: terminase GpA
• Protein accession: YP_001829875
• Protein GI: 182681715
• COG category: [R] General function prediction only
• COG ID: [COG5525] Bacteriophage tail assembly protein

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGAAA CCTTAGGTAT AGCCGCCCTA GAAAACCAAG AAGGCGTTGA TCAGATGATC 
AGCAACGCCT TACAGATGCT GCGACCGCCC CCAGCAATGA AGCCTTCCGA ATGGGCACAG 
ACACGCATCC GCATTCCTGA AGGCAACGCC ATTCCAGGCC CCTTGCGCCT AGACAACGCC 
CCCTACCAAC GCGAACCCAT GGATATGCTG GTGGACCCGG ACTGCTACCG CGTCACCCTG 
AAATGGGGCG CACAAGTCGG TAAAACCATG CTGGCCTTAT GCGTACAAGG CTACTGCATC 
GAAATGGCCC CCCGCAGCCA AATGATGCTG CAACCCTCCC AAGGTGATTT ACAAGCCTGG 
TTAGAAACCA AATTCTCCCC GCTGATTGCA GCCAACCAAG GATTGCAACG CCTGATTGCA 
AAACCGCGTG GCCGCGATGG CGTCAACAAC CAGCGGATGA AATCCTACCC TGGAGGATTT 
CTGATGTTTG CCTGGTCCGG CTCACCAAAG ACCATGCGCG GGCGCTCAGC ACCACTGATT 
GTGTGCGACG AAATAGACGG CTACGAACGC ACGGACGAAG GCCACCCGGT GAGCCTGTTG 
TGGCAGCGCG CCGCGACCTT TGGTGACGAA CGGTTTCTTC TGGAGATCAG CACACCCACC 
ATTGAAGGTG CCAGCTATAT TGATGACGCC TACCGAGCCG GAGACCAGAG GCGATTTTAC 
GTACGCTGCC CCGCCTGCGG ATGCGAACAA ACCCTAGAAT GGGAACACGT CAGCTGGGTT 
GGACGCCAAA GCGACCCCGA CGCCGACTTG GCCGCTATCG ACGCCCACCA ACCGCACACT 
GCACGCTACG TCTGCCAAGG GTGCGGCGTA TGCTGGGATG ACGGCCAACG CATTGCAGCC 
GTTCGCCAAG CCCACTGGCA AGCCAGCAAA CCCTTTAACG GCCATGCCTC CTACGAACTG 
AACGAACTGT ACTCCACCTT CCGCCGCCAA AGCGCCATCG TTCAAGACTA CCTGGACAAA 
CTCAAACACC AGGACCTACA AACATTCACC AACGTCAGCC TGGCCCGCGT CTGGAGCGAG 
ACCGCCGAAC AGGCCGACAT GGATGACCTA CTGCGCCGCC TTGAAACCTA CCTTGCTGAT 
GTCCCTATGG GCGGTGTCTT TCTCACTGCG GGCATCGACA TGCAAACCGA CCGCCTTGAA 
GTGGAAATTG TCGCATGGGG CATTGACGAA GAATCCTGGT CCATCCATAC CGCCGTTCTC 
TACGGCGACC CCCTCTTAGG CGACGTCTGG GACGCACTGG ACCGCTACCT CTCTACCACC 
TGGCAGCACG AAAGCGGCCT ACGTCTCCCC ATCCAGGCCG CCTGCTTAGA TACCGGAGGC 
ACCTGCGGCT ACACCCAAGC CGCTTACCAA TACCTGCGTA CCAGGACAGG CGGACGCGTC 
TTTGGCATTA AAGGCGTTGG CGGCTGGGGC CGTCCCATCG TAGACAAAGC ACAACGCAAA 
CATTCCGGAC GCAACGCACC CAGAATCAAC CTCTTTACCG TTGGCGTGGA CGAAGCAAAA 
TTAATTGTGA TGCGCCGCCT CGCCATCACC CAGCCTGGCC CAGGCTACTC CCATTTCCCC 
ACAGACCGCT CCCCCGACTG GTTTGCACAA CTGACCGCTG AAAAATTGCG TACCCGCTAC 
CTCAAAGGCC AGCCAATACG CCAATGGACC AAACCCGACA AAACCCCCAA CGAAGCATTG 
GATTGCCGCG TCTACGCCTA CGCCGCCCTC AAAATCATCA ACCCGCATCT ACCCCATGAC 
GCAAAGCGTA TTAAAGATGC CGCCGCCTTA CTACCCAAGG AAAAACTGCC ACAGGACCCC 
ACCCCAGAAG TGCAACACCA TACCCCCCAT CTTCGCCCCC AACGTCCCCG GCCCCCCTTA 
AGACGCCGGA GAACATGGGC TAACGACTGG TGA 

 

Protein sequence

MSETLGIAAL ENQEGVDQMI SNALQMLRPP PAMKPSEWAQ TRIRIPEGNA IPGPLRLDNA 
PYQREPMDML VDPDCYRVTL KWGAQVGKTM LALCVQGYCI EMAPRSQMML QPSQGDLQAW 
LETKFSPLIA ANQGLQRLIA KPRGRDGVNN QRMKSYPGGF LMFAWSGSPK TMRGRSAPLI 
VCDEIDGYER TDEGHPVSLL WQRAATFGDE RFLLEISTPT IEGASYIDDA YRAGDQRRFY 
VRCPACGCEQ TLEWEHVSWV GRQSDPDADL AAIDAHQPHT ARYVCQGCGV CWDDGQRIAA 
VRQAHWQASK PFNGHASYEL NELYSTFRRQ SAIVQDYLDK LKHQDLQTFT NVSLARVWSE 
TAEQADMDDL LRRLETYLAD VPMGGVFLTA GIDMQTDRLE VEIVAWGIDE ESWSIHTAVL 
YGDPLLGDVW DALDRYLSTT WQHESGLRLP IQAACLDTGG TCGYTQAAYQ YLRTRTGGRV 
FGIKGVGGWG RPIVDKAQRK HSGRNAPRIN LFTVGVDEAK LIVMRRLAIT QPGPGYSHFP 
TDRSPDWFAQ LTAEKLRTRY LKGQPIRQWT KPDKTPNEAL DCRVYAYAAL KIINPHLPHD 
AKRIKDAAAL LPKEKLPQDP TPEVQHHTPH LRPQRPRPPL RRRRTWANDW