| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1133 |
|---|
| Symbol | |
|---|
| ID | 6203981 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 1279607 |
|---|
| End bp | 1280389 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641702658 |
|---|
| Product | uroporphyrinogen-III synthase |
|---|
| Protein accession | YP_001829835 |
|---|
| Protein GI | 182681675 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1587] Uroporphyrinogen-III synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0764964 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACACCA TGACAAGACC AGACCAAGCC CGCACCCCAT GGTATTTGTT GTCACTACGT
CCGGCAAACA ACCACGCCGC ACTGCGCCGT GCCGTCGCGC GTTACGGAGG AGGATTAATC
GCACTATCCC CGTGGCGATT AAAGCGTCTA GACAGTCCAG AGACACGCTC TGCATTAGCA
TCAGCATTGA CGGCATCAAC CCTGGTTTTC ACCAGTCCAG AGGCAGTACG TGCGGCACAT
GCTCTGCAAA CGCTACGCAC TTCACCTGGA CAAGTATGGT TGTGCGTTGG CGCAAGCACT
GCACGCGTGC TACAACAGTG CGGTATTACA CGCGTGTTGC ACCCAACACA AATGAACAGT
GAAGGGTTAC TCACATTACT GGCACAGCAA CCCCCAACCG AAGTTGGACT TATTACCGCA
CCAGGAGGAC GTGATTTACT CCAGCAGAAG CTTTTAGAAA ATGGCATACG GTTACATCGT
GCCGATGTCT ACGAACGTCA ACCGTTACGT CTGCGCACAG CCACATTGGA TACACTCCAG
CGTAATGCCA CACGTAGCCT GCTTGCACTG AGCAGTGCCG AAGCTTTAGC ACTCTTACTG
CCACAATGGC CGGATAACCT GCGAAGGATC CTGTACCAGC GTCCAGTGAT TGCAACAAGC
AAACGGCTAG AAGATCTAGC ATGCGCGCGA GGATTTATCA GCGTTTATCG CGCCACAGGA
CCATTGCCGC GCCAGTTAGC AGCAACAGCA GCGGCTTTTC GACCCGATAA AACAGCACAA
TGA
|
|---|
| Protein sequence | MHTMTRPDQA RTPWYLLSLR PANNHAALRR AVARYGGGLI ALSPWRLKRL DSPETRSALA
SALTASTLVF TSPEAVRAAH ALQTLRTSPG QVWLCVGAST ARVLQQCGIT RVLHPTQMNS
EGLLTLLAQQ PPTEVGLITA PGGRDLLQQK LLENGIRLHR ADVYERQPLR LRTATLDTLQ
RNATRSLLAL SSAEALALLL PQWPDNLRRI LYQRPVIATS KRLEDLACAR GFISVYRATG
PLPRQLAATA AAFRPDKTAQ
|
|---|
| |