Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1110 |
Symbol | |
ID | 6202768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 1257850 |
End bp | 1258902 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641702634 |
Product | threonine dehydratase |
Protein accession | YP_001829812 |
Protein GI | 182681652 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATAC CTGATGTAGG GCACACAGTT GTCAAGCAAC CCAATGCAAG TAACGTCAAT ACCGTGAGTG TGGCCGATGT GTTGGCTGCA CAAGCCCGCT TACGTCGTTA TCTAATGCCT ACTCCAATTC ACTATGCCGA GCGTTTCGGA GTGATGCTGA AGTTAGAAAA TCTGCAACGC ACCGGATCCT ATAAAGTGCG CGGCGCACTG AACGCAATGT TAGTTGCGCT GGAACGCGGC GATAACCGCC CTGTCATTTG CGCATCAGCC GGTAACCACG CCCAAGGCGT AGCTTGGTCA GCTTACCGGC TTGGTATACA AGCAATCACT GTCATGCCTC ACGGTGCTCC GGCCACAAAG GTTGCAGGTG TTTCACATTG GGGGGCAACG GTACGCCAAC ACGGCCAAAG CTATGACGAG GCCTATACGT TCGCATGTGA GTTGGCTGAG CAAAACGATT ACCGCTTTCT ATCAGCATTC GATGATCCGG ATGTGATTGC CGGTCAGGGA ACTGTTGGCA TAGAGATCAC CGCGCATGAA CCGGATGTAG TCATTGTGCC GATCGGCGGC GGCGGCCTTG CTTCAGGCAT TGCTTTGGTG CTGCGCTCGC AGGGAGTACG TGTCATTGGC GCTCAGGTCG AGGGCGTGGA TGCGATGGCG CGTGCAATCC GTGGCGACAC ACGCGAGATC GCTCCAGTTT CGACCTTAGC TGACGGGGTG AAAGTCAAGA TTCCTGGTTT CATTACCCGC CATCTGTGTG CCAACTTGTT AGACGATGTA GTAATCGTGC GTGAGGCTGA ACTGCGCGAA ACATTGGTGC GTTTAGTATT GGAAGAACAC CTGATCGCCG AAGGGGCAGG CGCACTGGCA TTGGCCGCTG GCCGCCGCGT TGCAGGTAAG CGCAAGTGTG CAGTGGTCTC CGGAGGTAAT ATTGACGCTG CAGTACTGGC CAAACTGTTG TCCGAAGTAA GACCACGGCC ACCCCGCAAA CCACGTAGGC GTAGTGCAGA TCGCCCCAAC AATTGCGGCA ATTTACCGCT CCCTTTTAAC TGA
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Protein sequence | MDIPDVGHTV VKQPNASNVN TVSVADVLAA QARLRRYLMP TPIHYAERFG VMLKLENLQR TGSYKVRGAL NAMLVALERG DNRPVICASA GNHAQGVAWS AYRLGIQAIT VMPHGAPATK VAGVSHWGAT VRQHGQSYDE AYTFACELAE QNDYRFLSAF DDPDVIAGQG TVGIEITAHE PDVVIVPIGG GGLASGIALV LRSQGVRVIG AQVEGVDAMA RAIRGDTREI APVSTLADGV KVKIPGFITR HLCANLLDDV VIVREAELRE TLVRLVLEEH LIAEGAGALA LAAGRRVAGK RKCAVVSGGN IDAAVLAKLL SEVRPRPPRK PRRRSADRPN NCGNLPLPFN
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