Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1106 |
Symbol | |
ID | 6203914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 1251928 |
End bp | 1254111 |
Gene Length | 2184 bp |
Protein Length | 727 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641702630 |
Product | carboxyl-terminal protease |
Protein accession | YP_001829808 |
Protein GI | 182681648 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTTAC GAATCCTTAA CTCCTTGAAA GTTGCCCTAC TAACCCTGGC TATCACTACC GCTCCAGCGT TGATGGCCAA ATCGGACAGT GCATCTCCTC AAGTGGCGAC GCCAGATCAA ACCACAGCGA CCAAGCTGGT GTATGGTCTG CTTTCAGATA GTCGTTATGC TTATCGGCTG CGCCCGCTTG ACGAAACGAT GTCCAAAGAC ATTTTCAAGC GCTACTTGGA AGCCCTAGAC AACAATAAGC AATTTTTTAC TGAAGCCGAT ATCGACAACT TCTCAGCATT CAAAGCTGAG ATACCTGATT CAATCCGCAA CGGCAATCTC AAGCCAGCGT TTAGTATATT TACGGTGTAT AAAAAGCGCG TTGCTGAACG TGTTACCTAT GCAAATCAGT TACTGAAACA AAACTTCGAT TTTTCCGGGC AAGAAAAATA CGAATACGAT CGTAGCAAAG CGCCATGGCC AGCCAGCCCG CAAGATCTGG ACGACATCTG GCGACGATCA ATAATGAACG ACTGGCTACG CCTGAAGTTG GCCGGAAAAA AGCCCGAAGA CATTCGGAAA ACTCTTAAAA AACGCTACGC CAACCTTCTT AAGACAGTGA ACGAACTAAA AGGTGAAGAC GTCTTTCAGT TGTATCTGAA CGCCTACACT AATTCGATCG ATCCTCATAC CGACTACTTC ACTCCACGCA CAGCCGATGC TTTCAACCAG CAGATGTCAT TGTCACTAGA AGGTATCGGT GCCCAGCTGC AAAAGCAGGA AGACATGGTG ATCATCCGTG AGGTGATTCC TGGAGGCCCC ACTGCGTTGG ATGGCACACT GAAACCTGGT GATCGCATCG TCGGCGTTGG TCAGGGCAAA GGCGGCCCAA TTGAAGATGT CATCGGCTTA CGCATCGACG ATGTCGTCTC CAAGATCCGC GGCAAGAAAG ACACCCAGGT ACGACTTGAA TATATTCCAG CCGAATCTGG AATCGACGGC GCACACCGTA TCGTGACTCT TACACGACAG AAGGTACGCT TAGCTGAGCA GGCCGCGAAG GGCGAAACCA TTACCATAGA GGGTAGCAAC GGCGACGCAC AGCGCCGCAT CGGCATCATC AAGCTGCCAA CGTTCTACGA GGATTTCGAA GGGCGTCGCC GCAACCTCGC CAACTATACG TCTGCAACAC GAGATGTAGC GAAGCTTTTA ACCAACTTCA AAACTGACAA AGTCGATGGC GTGGTACTCG ATCTGCGTAA CAACGGCGGC GGATCGCTGG ATGAAGCCAT TCAGCTCACT GGTCTATTCA TCGAACAAGG TCCTGTGGTG CAAGTACGTG AATCCGGGGG CCGTGTCACT GTCAACGGTG ATCGAGACGA CAAAGTCACC TGGGACGGCC CGCTGGCAGT ATTGATCAAT CGTGGCTCCG CTTCTGCATC AGAAATTTTT GCAGGTGCCA TCCAAGACTA TGGGCGTGGT TTGGTGATTG GAGAAACCAG CTTTGGTAAA GGCACAGTCC AAAATATTGT TGATCTGGAT CGTTGGCCGG CAAACGAAAG CAGACGATTT GGCCAAGTCA AATTGACCAT TGCTCAATTC TTCCGTATCA GCGGATCCAG CACCCAGCAC AAAGGAGTGT TACCAGACAT TGCGTTCCCA GCAAGCGTAG GTGCAACTGA GTTTGGGGAG AGCACTTATG AAAATGCCTT GCCTTGGACT CGAATTGCCT CGCTCCAACA CACCCAATAT GGCAATTTCA GCCCAATATT ATCGAAACTG AAAAAAATTC ATATCAGTCG CACTGCCAAT GACATTGAAT TCAAATGGTG GCAAGAGGAT GTACATAATT TCAGTCTGGA AAAGGAAAAG AAGTACGTCA TACTCAACGA AGCCGAACGT CTTGCAGAAC GTAGAAAACA AGAAACTCAA CATAGAGAAC GCCAAACTAT TCGGAAAAAC CTTGGCTTGC AGCTAGATCC TTTGTCTGAG GAGAGTGACG ACGGATTGAT TGGCAACGAG CGTGATATCG CCAAGGACAC TGCGCGCGAA AAGCTGGCCG ACAAGCGTCC TGACCCTTTA TTGCATGAAT CAGCCGCAAT TCTGACCGAT ACAATTAACC TACTGGAAAA GGACCAGATA CTATCGGCAC AGGTACTTTT ACAGTCCACC ACACCGGGAC ACTGGGCCAA TTGA
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Protein sequence | MSLRILNSLK VALLTLAITT APALMAKSDS ASPQVATPDQ TTATKLVYGL LSDSRYAYRL RPLDETMSKD IFKRYLEALD NNKQFFTEAD IDNFSAFKAE IPDSIRNGNL KPAFSIFTVY KKRVAERVTY ANQLLKQNFD FSGQEKYEYD RSKAPWPASP QDLDDIWRRS IMNDWLRLKL AGKKPEDIRK TLKKRYANLL KTVNELKGED VFQLYLNAYT NSIDPHTDYF TPRTADAFNQ QMSLSLEGIG AQLQKQEDMV IIREVIPGGP TALDGTLKPG DRIVGVGQGK GGPIEDVIGL RIDDVVSKIR GKKDTQVRLE YIPAESGIDG AHRIVTLTRQ KVRLAEQAAK GETITIEGSN GDAQRRIGII KLPTFYEDFE GRRRNLANYT SATRDVAKLL TNFKTDKVDG VVLDLRNNGG GSLDEAIQLT GLFIEQGPVV QVRESGGRVT VNGDRDDKVT WDGPLAVLIN RGSASASEIF AGAIQDYGRG LVIGETSFGK GTVQNIVDLD RWPANESRRF GQVKLTIAQF FRISGSSTQH KGVLPDIAFP ASVGATEFGE STYENALPWT RIASLQHTQY GNFSPILSKL KKIHISRTAN DIEFKWWQED VHNFSLEKEK KYVILNEAER LAERRKQETQ HRERQTIRKN LGLQLDPLSE ESDDGLIGNE RDIAKDTARE KLADKRPDPL LHESAAILTD TINLLEKDQI LSAQVLLQST TPGHWAN
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