Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1098 |
Symbol | ubiB |
ID | 6203899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 1242715 |
End bp | 1244373 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641702622 |
Product | putative ubiquinone biosynthesis protein UbiB |
Protein accession | YP_001829800 |
Protein GI | 182681640 |
COG category | [R] General function prediction only |
COG ID | [COG0661] Predicted unusual protein kinase |
TIGRFAM ID | [TIGR01982] 2-polyprenylphenol 6-hydroxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.796665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGCGT TATTCCGGGC CTGCCGCATT GGCAAGGTCA TGCTGCGCTA CCGCCTGGAT ACGTTGCTGG ACGGTACAGC CGTAGAGCGC TGGTTGCGTT TGGCTAAGCC TTTTGTACCT CGCATCAGCG CTGAAATTGT TGAGCAGTCC AGAGGGCGTC GGTTGCGTTT GGCACTGCAG GAATTGGGGC CTATTTTTGT GAAGTTTGGG CAGATTCTGT CCACTCGCAG GGACTTGGTA CCCCAGGATA TCGGTGATGA GCTGGTCATG CTACAAGACC GAGTAGAGCC TTTCGAGGGG CAGACTGCGC GCAGTATCAT CGAAACTGCG CTAGGCAAGT CGGTTGAAAG TGCATTCGCA CACTTCGATA CTGTGCCACT GGCCAGTGCT TCAATCTCGC AGGTCCATGC AGCTACGCTG CATGACCGAC GTGCAGTTGT GGTCAAAGTG TTGCGTCCTG ATATTGAGCA TCAGATCAGT GACGACATCG CCTTGCTTAA ATCGCTGGCT ACGTTGGTCG AGCATACTCA CCCTAATGCG GATAAAATCC GTCCGCGCGA GATTGTGGCG GAGATAGAAA CCACCTTGGC GGCTGAGTTG GATTTGCAAC GTGAAGGTGC CAACGCCAGT GTGTTGCGTC GCTTCTGGGA GGCGTCCGAC GACATATATG TACCTGAAGT AATTTGGTCG CACACCGCCG AACGGGTGCT GACTCTGGAA CGTATGTATG GCATTCCCTC GGACGATATT GCGTTGCTTG ATGCCTCGGG TATTGATCGT AAAGCTCTTT CGAGCAAGGG AATCCGCGTG TTTTATACCC AGGTGTTCCG CGATAATTTT TTCCATGCCG ATGCGCACTC TGGAAACATT TGGGTCGACA GTGATCCGGC ACGCAAATCC AATCCACGTT TTATTGTGCT GGATTTCGGC ATCATGGGCC AACTGTCGCA GAAAGATCAG TACTATTTGG CAGAGAATTT CATGGCCATC TTCCATAAAG ACTACCGGCG AATCGCTGAG TTGCATGTGG AAGCAGGCTG GATACCTCCG CATGTCCGCA TTGAGGAGTT GGAAGCAGCG GCACGTTCAG TCTGTGAACC ATACTTTACG AGGCCTTTAT CCCAGATCTC GCTTGCTGAA GTAATGATGA AATTGTTCCA TGTTGCCCGA CGTTACCAGC TTACGTTACA GCCTCAATTG ATTTTGCTTC AAAAGACGCT GCTCAATATT GAGGGTGTAG GTCGTCAACT CGATCCTGAA TTGGATATCT GGGTCGTAGC GCGCCCAGTG CTCGAACGCA TTCTACGTGC CCGTTACAGT CCGCGTCATG CGTTGAAGGA GTTAAATAAA CGCTTGCCTG AGATCATGAC TCATGCCCCA GACACACCGC GCCTCATACA TACCTGGTTA GTACAGCAGG TCGAAAGCCG GAAACAGAAT GACGTTTATT TGCAACAAAT ACGCGCGTTA GCTATGACTT TGCAAGGCTT GCAGCGCCGT GTGGTCAATG CGATTGTGGG TAGCGGCTTG CTGGTGGCGG CTGCGGTATT GTATGGCCTA CATCCGGATG GTTTGTACTT GGGAACGATT CCAGTGTGGA GCTTGATTAG TGGGTGCATC GGCGCGTTGG CCTTGTTCAG TGCTTGGTGG CGAAGCTAA
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Protein sequence | MKALFRACRI GKVMLRYRLD TLLDGTAVER WLRLAKPFVP RISAEIVEQS RGRRLRLALQ ELGPIFVKFG QILSTRRDLV PQDIGDELVM LQDRVEPFEG QTARSIIETA LGKSVESAFA HFDTVPLASA SISQVHAATL HDRRAVVVKV LRPDIEHQIS DDIALLKSLA TLVEHTHPNA DKIRPREIVA EIETTLAAEL DLQREGANAS VLRRFWEASD DIYVPEVIWS HTAERVLTLE RMYGIPSDDI ALLDASGIDR KALSSKGIRV FYTQVFRDNF FHADAHSGNI WVDSDPARKS NPRFIVLDFG IMGQLSQKDQ YYLAENFMAI FHKDYRRIAE LHVEAGWIPP HVRIEELEAA ARSVCEPYFT RPLSQISLAE VMMKLFHVAR RYQLTLQPQL ILLQKTLLNI EGVGRQLDPE LDIWVVARPV LERILRARYS PRHALKELNK RLPEIMTHAP DTPRLIHTWL VQQVESRKQN DVYLQQIRAL AMTLQGLQRR VVNAIVGSGL LVAAAVLYGL HPDGLYLGTI PVWSLISGCI GALALFSAWW RS
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