Gene XfasM23_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_1080 
Symbol 
ID6203845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand+ 
Start bp1225028 
End bp1225648 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content54% 
IMG OID641702604 
Productprophage antirepressor-like protein 
Protein accessionYP_001829782 
Protein GI182681622 
COG category[K] Transcription 
COG ID[COG3617] Prophage antirepressor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00000000174443 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAGT TACCTGCTGC CGTGTGTTTT TCCGGCAAAT CCCTTTCCAT TATTGATCGT 
GACGGTACGC CGTACTTGAG TGCACGCGAG TTAGCCCGTG CTTTGGGCTA TGCCGATGAA 
CGATCCGTAT TGCGCATCTA TGCACGTCGC ACGGATGAGT TCACCGAACA AATGACCTGC 
GTGGTCAAAT TGACCCCTCA GGGTGAGCAG GCCCGTGATA TCCGTATCTT CAGCCCCCGT 
GGCTGCCACC TGGTGGCGAT GTTCGCCCGT ACTTCAGTCG CCGCCGCGTT TCGTCGCTGG 
GTGCTGGATG TGCTGGAAGT CCTTCCCTCG ATCCGCAAGA CGGGGAGCTA TACCGCTACC 
GGAGCGCTCG TGAATGACGA TGTGCTCTAC AACATCTGGT TTCTGTGCTG CCACTTTAAA 
GGACTGTACG AAATGTCTTT TGAAAACAAG ATTCCGCAAG CATTGTCTTG TCTTGGAGCC 
AGGAAAATGG GCGGAAGGCT TTACACCCAT TTAGTGGATG GCATGGATGG AGGTGTTCTC 
AGAATAGAAA AAGCCCTCGG CCCACACATG GAACAGGCCG CCCAAAAGGT CATGGGCAAT 
GCAAGGAGAC ATATCCAATG A
 
Protein sequence
MTQLPAAVCF SGKSLSIIDR DGTPYLSARE LARALGYADE RSVLRIYARR TDEFTEQMTC 
VVKLTPQGEQ ARDIRIFSPR GCHLVAMFAR TSVAAAFRRW VLDVLEVLPS IRKTGSYTAT 
GALVNDDVLY NIWFLCCHFK GLYEMSFENK IPQALSCLGA RKMGGRLYTH LVDGMDGGVL 
RIEKALGPHM EQAAQKVMGN ARRHIQ