Gene XfasM23_1040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_1040 
Symbol 
ID6203760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp1188768 
End bp1189928 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content57% 
IMG OID641702564 
ProductHI1409 family phage-associated protein 
Protein accessionYP_001829742 
Protein GI182681582 
COG category[S] Function unknown 
COG ID[COG3567] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01555] phage-related protein, HI1409 family 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCGGG AATGGGTCAC GTTGAATACG GCGCTGCACG CCGATGCGCT GGAGCCGATG 
CATCGTCTGG AACAGGTGTT GAACGTGCGC GCCAAGGTAC GTGATGCGCT GGCCTGGGCC
CGGTTGTACG GGGGTGCGGT GCTGTTTATC AATGTGCATG GGCAAGACCC GTGCTTGCCG
TTTGATCCGG CCTCGGTCAT GCCGGGGACC AGGCTATCGC TGACGGTGTT GGATCGCTGG
CGGGTGGCGC TGGGCAGTGG TCAGATGGAC CAGGACCCCT TGAGTGAGAC CTACGGGCAA
CCGCGCTGTT ATCAGATTGC CGGATCGGTG GAGCGGGTGG ACCATTCACG GATGATTGCT
TTTTCTGGGG CGGAACTGCC CTGGGAGGCA TTCAGGGGGA ACGGCTACTG GCATGACTCG
GTATTGCAGG CCATGTATAA CGCGCTCAGC CGCTATGACA CCGCGACCCA GGGCACGGCG
TCGATGTTTT TTGAGGCGGT GGTGGATGTA TTGCGGATCT CTGGACTCAG CGACACGCTC
GCCTCAGACC AAGGGACGCA AGAGGTACAC AAGCGCTTTC AGTTAGCGGC CATGATGAAA
TCATTCAATC GGATGCTGCT GCTGGATGCT AAGGATGAAT ACACCCAAAA AACCAATCAC
TTTGCGGGTG TGAAGGATGT GATTGAGCAA TTCATGATGG ATATTTCAGG GGCGGCGGAT
ATTCCGGCAA CCCGGTTGTT TGGTCAGTCC CCCCAAGGCA TGAACGCCAC CGGTGACAGT
GATATTCGCA ATTATTACGA CCGCATCAAG GCGCAGCAGG AGGATGAGCT GCGGCCTGTG
CTGAGGGTGT TGTATGAGGT GCTGTTTCGG GCCTCTGTGG GGGAGTGTCC TCATGATCTG
GAGATCCAGT TCAATTCGCT ATGGCAGATG AGCCAGACAG AACAGGCAAG CATTGAGAAG
CTGCGCGCCG AGCGTGATCA GATTTACCTG GCGCATGGTG TGATCGGTCC AGACGTGCCC
TGTGCTGAGC TGCTGGAACA AAAAACTTAT TCAAAGATCA CCGAACGCGA TGTGACGCTG
GCGGCGGAAC TGTCTCAGGC GATGGAGCCT CCAGATGTGT GGCCATTGGT GGAAACGACA
GCATCGGCTT CCAATACATA G
 
Protein sequence
MTREWVTLNT ALHADALEPM HRLEQVLNVR AKVRDALAWA RLYGGAVLFI NVHGQDPCLP 
FDPASVMPGT RLSLTVLDRW RVALGSGQMD QDPLSETYGQ PRCYQIAGSV ERVDHSRMIA
FSGAELPWEA FRGNGYWHDS VLQAMYNALS RYDTATQGTA SMFFEAVVDV LRISGLSDTL
ASDQGTQEVH KRFQLAAMMK SFNRMLLLDA KDEYTQKTNH FAGVKDVIEQ FMMDISGAAD
IPATRLFGQS PQGMNATGDS DIRNYYDRIK AQQEDELRPV LRVLYEVLFR ASVGECPHDL
EIQFNSLWQM SQTEQASIEK LRAERDQIYL AHGVIGPDVP CAELLEQKTY SKITERDVTL
AAELSQAMEP PDVWPLVETT ASASNT