Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1025 |
Symbol | |
ID | 6203678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 1178070 |
End bp | 1179959 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641702549 |
Product | hypothetical protein |
Protein accession | YP_001829727 |
Protein GI | 182681567 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTCTCG ACGAATTCCT GATCCGCCTT GGCGCGGTCG CTGACACCTC AGGCTTCAAC ACCTTTAGCA CCGGCCTGAC CCGCGTTACG GGCCTCGTGA CGGTGGCCGC CGCCGCCATG GGCGGGGCGC TGGCGGGAAT GAATCGCTTT GTCGGCAGCG CCTTAAGCGA ACTCAATGCC CTCAACAGTG CCAGCCAGCG CACCGGAGCC AGCCTGTCCT TGCTCCAGGA GCTGGGCTAT GCGGCGCGTT TGAATGGCTC CTCTGTGGAG GCCTCGACCC GTTCTATTGA ATCCTTGTCC CAAAAAATAG GCGAAGCCGC CAATGGAGTG GGGCGCGGGG CCATGCTGTT CCAAAAGCTG GGCTTGCAGG CCCGACAGGC CGATGGCTCC GTTAAATCCG TTGGCGACAT GCTGGGCGAT GTGCAAGAAA AAATCCGTGG CTTGTCGGCA CCACAACAGC AGTCCATCCT AGCCAACCTG GGCATGGATG CCACGATGCT GCAAACCCTG CGCCTGAGTC GTGAAGAGTT AAACAGCGTC TTCCAAGAGG CACACGATCT AGGCGTCATC ACCGCGGATG GTGCCGATAC CGCGCTGGAG TATGGCGATG CGATGGAACG CCTGCGCGTG GTGCTGGGGG CGTTACGGAC CAACATCGCC ATTGGGGTGG CACCGGCCTT CACCCGGCTG ATTGAGCACT CCAAACACTG GTTGATTGCC AATAAAGAGC AACTGCGTGA TGGCATCGGC AAAGTCGTCA AGATCCTCAT TGCAGCGGGC ACCGCCGTAT GGAACGTCAT CCGTGCCGTG AACAGCGCGG TGAACCAAAC CATTGGTTGG AAAGCGGCGC TGCTGGCCGT GGGCGCGGTG CTGGCCCGGG CCTTTGCACT GAACCCACTC ACCTGGCTGA TTGCGGGGAT CGTGGCCCTC GTGGCCTTGG TCGATGACTT CATAACCTAC CTGGACGGCG GAGAGTCCTT GCTCGGTGCC TTCTGGGGTC CACTGATTGC CTACGCCAAG CGCGCCAAGG CCGTGATTGA ACACCTTACG CCCGCACTCA ACGCCCTTGG CGTCCTCTTA GCGGGACTGG CCATCGGTCA CGTGGTGAGT CATATTGGCC GCCTTTTGGG TGCAGGCCGC ACCCTGGCGC TGTGGCTGGC GGGGCCGTTG GTGAAAGCGC TCCAGGTTGC CGCGCTGGCG TTGCGGGTCG CGTTTTTGTC CAACCCCATT GGAGTAGTGA TTGCAAGCGT GGCCCTGTTG GCCTATGCGA TCTATACCCA CTTTGACAAG ATCAAGCAGG CGGTGGGCAC CGCTTGGGAC TGGTGCACCC GCACCACCCA TGCCGCGGTT GGGTCCATCC AACACACGCT GCAAGAGGCT GCCGCCGCCG CCAAGACCAC CTGGGCCAGC GTCAAGGACG CCTGTGCGCT GGCCTTTAGC CACAGCATCG CCAGCGCCGA TAGTGCCGTA AACCGCTTGC GGGCCGTGTT CAGCGCCATG GGCAGCCGTA TCAGCGCCGC CCTGACCAGC GCCTTCGACA CCCTCATGAC GCTGTGGGAC CGTACCGTCG GGCGTATCGC CCAGGGGGCC GAGCGGATCA AAGGCTTTTT CCGAGCGATT GCTCCAACAC TGAAGCAGGC CGGTCGTGAC ACCCAAGACG TGGCACAGCG CGTCAATGCA CAGGTGCAGG CCGCCCAGAC GACAGCGCGT CACGCCGCTG CTCAGGCCGC CACGCCCGCC CGTTCTCAGC CCAACGTGCA TTCCCAACAG GAAGTAAAGA TCGATATCCA CACCGCCGAC CCGATCCTGG CCGGTCGCCA AGCCGCCGCC GACATCAACA GACACCACCA GATGGCGCTG CGCAATACCG GTAGTGCTGT GGCGTTTTGA
|
Protein sequence | MILDEFLIRL GAVADTSGFN TFSTGLTRVT GLVTVAAAAM GGALAGMNRF VGSALSELNA LNSASQRTGA SLSLLQELGY AARLNGSSVE ASTRSIESLS QKIGEAANGV GRGAMLFQKL GLQARQADGS VKSVGDMLGD VQEKIRGLSA PQQQSILANL GMDATMLQTL RLSREELNSV FQEAHDLGVI TADGADTALE YGDAMERLRV VLGALRTNIA IGVAPAFTRL IEHSKHWLIA NKEQLRDGIG KVVKILIAAG TAVWNVIRAV NSAVNQTIGW KAALLAVGAV LARAFALNPL TWLIAGIVAL VALVDDFITY LDGGESLLGA FWGPLIAYAK RAKAVIEHLT PALNALGVLL AGLAIGHVVS HIGRLLGAGR TLALWLAGPL VKALQVAALA LRVAFLSNPI GVVIASVALL AYAIYTHFDK IKQAVGTAWD WCTRTTHAAV GSIQHTLQEA AAAAKTTWAS VKDACALAFS HSIASADSAV NRLRAVFSAM GSRISAALTS AFDTLMTLWD RTVGRIAQGA ERIKGFFRAI APTLKQAGRD TQDVAQRVNA QVQAAQTTAR HAAAQAATPA RSQPNVHSQQ EVKIDIHTAD PILAGRQAAA DINRHHQMAL RNTGSAVAF
|
| |