| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1004 |
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| Symbol | |
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| ID | 6203600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 1161601 |
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| End bp | 1164330 |
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| Gene Length | 2730 bp |
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| Protein Length | 909 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641702531 |
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| Product | beta strand repeat-containing protein |
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| Protein accession | YP_001829709 |
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| Protein GI | 182681549 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCCCCAC TGCAACCATC ATTAGCTGCG AAGATCGGGC GGCATCTTGA ATTGACTAAT
ACAGAAGCCG CGCATGCGCT TGGTTTGACG GGCAGTGGCT TTATTATTGG TATGGTTGAC
ACCGGCGTGA ATCGTAACAA TATTGCGTTA CAGGGGAAGG TGATTCGCAA CGGTGTCTAT
AATTTCTATA CGGATTATCA CGCCCCCTCG GCTCCGGACG ATGTTGACGA TCATGGCACC
TTAGTGGCGC AGCTAATTGC TGGTAAACCG GTTGAACACT GGCCTGGTGG CATCGCACCA
GGTGCCTCCA TCTTCTCAGC GCGTGTTTAC CCGTCTGAAG AAGAATTTGA AGCATACATC
GAAGAACAAA TGGCATCCTC ACACATCGTG GATACTTATG AAGCAGAAGC ATCGAAGATA
AAGCTTATTA ATGCTGACAT GATTGCTGCG GGAGTGCGCA TCCAAAACAA CTCATGGGGC
CATTCGAGGG CTGGAATGTG GACAGATCCA AAGATCACGA ATTTGTTCGC GGACACATAC
CGTGACTTTG TGATCGGCAA CAATGGTTTG GTGGTATTCA GCACTGGTAA CGAAAAGCTA
TCACAACCAA ACGGACTTGC CAGACTGCCG AGCTTGCTTA CGGCGGAGGG CTCCCCATTG
GCCGCCGATC TGGAAAAGGG ATGGTTAGCC GTCGCTGGAC TGGACAGTTT TGATCACCCC
GACCAGTTGG GTTCCTACTC CAATCACTGT GGTGTTGCAA TGCACTATTG CTTGGCAGCC
CCAGGTAATG TCCTAGTCAT TGATTCCAAC GTGACTACCA CCCCTATTGG CAATGATGAA
TACAAAGAAC AACGCGGCAC GTCCTTTTCA GCGCCTTTGG TATCTGGTGC AGCGGCCTTG
GTGTGGGAGG CATATCCATA CTTCACCAAT GACCTAGTGC GTCAGACATT GCTTGGGACG
GCCACCGATC TTGGTGCTCC TGGTGTGGAC GAAGTATTCG GGTATGGCGC CCTGAATGTG
GGCAAAGCGG TGCGTGGGCC CGCCAAGTTT GATTGGGGCG ATGTTAAAGT CAGCTTCAAT
GACAGCCGTT CGACCTGGTT CAATGATATT AGCGGCGGCG GTGGTTTGAT CAAAGACGGT
ACAGGAACCT TGGTGCTTGC TGGCAGCGCC AACCAATATA GTGGAGCGAT CCAAGTGCTT
GGAGGCACAC TCCAGGTAAG CAGCCTAGGT GAGTCGGCGG TGAGCATTGC CCACAGTGCG
ACCTTGATTG GCAGTGGTCG CTTTGGTGGT GCAGTGAGCA ATGCAGGCAC CTTAGAGATT
GGTACAGATG GCCTAAAGGT TCAAGGCGAT TACACCCAGT CTGAGACAGG GCGTCTTGCG
TTGAACGTGG GTGATCAACT GAGCGTTGCA GGCCATGCCA CCCTCCAAGG GGGTGAACTT
CAGGTGCTGG GCAAGCGCGA TTATGTGAGC TTGAATACCT CCTACAGCGT GTTACATGCG
GATGGTGGTT TGACCGGGAC GTTCTCGGGG TTGACCTGGG GTCCGGCGGT GCTGCTGGGA
GAAGGTCAGC TTCACTACGG TGCCAACGAT GCTAACGTGA CCCTGCAGCG CCTGGACGTC
AATGCGGCGG CTCGTGCATT GGGGATTGTT GATACTGTTG CGCAGGCTTC TGCCCGACGA
GTTGAGCAAG CGTTCCGTGA AATTGACATT CAGCAGGCCC AAGGCCGCGG TCAGTTATCG
ACTTCCTTTA TGGCGGCGGC GGCGGCCCTG CAACAGTCTG GGAGCGCACA AATGGCATCG
GCTTCGCTGC ATAGTTTGTC CGGTCAAGGG CATGTTGCGG CAACGGCGTC CAGCTTTGAT
GTTGTTGATG CGGGACGACG CAGCCTTGCC ACCCGTCTGG GTGAGCGCCC ATTGGGCGAA
CGTACGGTGA CGTGGCGTCA GTCATTGGGT GGTTCTGGTC ATGATGGGAC TGCTGGAGGC
ACATTTGCAC TGTCTGGCTG GTTGCTTGGG CGCGATACAC AACTGGCCTC TGGCGACATT
GTGGGTTTTG CTTTTGGTCA GTCTGAGGCC AGTCCATCCG GCAGCGTGTC AGGGCTACGT
GGTCTTGACA GACAAGTGCA AGGGCGTATG TATGTACAGC GTAGCCAAGG CCCCTTGTAT
GTATTGGGTC AGCTTGGTTT TGGCAGTTTT CAACGCCGTC TGGACCGGCA GTTGCAATTG
GGTCATTGGA GTGACTGGGC AAGCAGTCGC TACCGTGGTC AATTTTTCAG TGGGAGTGTA
GAGGCTGGGT ATCATTGGCG CCGTGGTGCA TGGGCCTTGA CGCCGTATGT GGGTGTAGAT
CAAACGCAGC TGAAGACGGA TGGATTCCGT GAGCAGGGAG GGGCGGGCTT TGGCTTACAG
GTACAGGCGT CCCAAGCTAT TCGGAGCCAG TTACTGGCTG GTGTTCGTAC TGAATTAGGG
TGGCGTGGAG TGAAGCTACG TGGCTATGGT GAGTGGCAGC AGACCTTGCG TCAGAGTGGG
TTGAATCCAC AGGCTAGCTT TACGGCGACA TCGTCATGGA CGCCCTTGGT GGCATCCCCC
TGGTCTAGTC GTTCTGGCGG ACTTCTTGGC TTATCAATGG TCTGGCCCGT GGGGATGACG
GCAGGAGAGT GGAGCATGGG TGTAGAACAC TTCTTTGGTG CCCGTAAACG CAGTGATAGC
TTGGGTTTGC GTTATCAGCT GAGTTTCTAG
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| Protein sequence | MPPLQPSLAA KIGRHLELTN TEAAHALGLT GSGFIIGMVD TGVNRNNIAL QGKVIRNGVY
NFYTDYHAPS APDDVDDHGT LVAQLIAGKP VEHWPGGIAP GASIFSARVY PSEEEFEAYI
EEQMASSHIV DTYEAEASKI KLINADMIAA GVRIQNNSWG HSRAGMWTDP KITNLFADTY
RDFVIGNNGL VVFSTGNEKL SQPNGLARLP SLLTAEGSPL AADLEKGWLA VAGLDSFDHP
DQLGSYSNHC GVAMHYCLAA PGNVLVIDSN VTTTPIGNDE YKEQRGTSFS APLVSGAAAL
VWEAYPYFTN DLVRQTLLGT ATDLGAPGVD EVFGYGALNV GKAVRGPAKF DWGDVKVSFN
DSRSTWFNDI SGGGGLIKDG TGTLVLAGSA NQYSGAIQVL GGTLQVSSLG ESAVSIAHSA
TLIGSGRFGG AVSNAGTLEI GTDGLKVQGD YTQSETGRLA LNVGDQLSVA GHATLQGGEL
QVLGKRDYVS LNTSYSVLHA DGGLTGTFSG LTWGPAVLLG EGQLHYGAND ANVTLQRLDV
NAAARALGIV DTVAQASARR VEQAFREIDI QQAQGRGQLS TSFMAAAAAL QQSGSAQMAS
ASLHSLSGQG HVAATASSFD VVDAGRRSLA TRLGERPLGE RTVTWRQSLG GSGHDGTAGG
TFALSGWLLG RDTQLASGDI VGFAFGQSEA SPSGSVSGLR GLDRQVQGRM YVQRSQGPLY
VLGQLGFGSF QRRLDRQLQL GHWSDWASSR YRGQFFSGSV EAGYHWRRGA WALTPYVGVD
QTQLKTDGFR EQGGAGFGLQ VQASQAIRSQ LLAGVRTELG WRGVKLRGYG EWQQTLRQSG
LNPQASFTAT SSWTPLVASP WSSRSGGLLG LSMVWPVGMT AGEWSMGVEH FFGARKRSDS
LGLRYQLSF
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