| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1000 |
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| Symbol | |
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| ID | 6203555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 1155253 |
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| End bp | 1156845 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641702527 |
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| Product | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit |
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| Protein accession | YP_001829705 |
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| Protein GI | 182681545 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.362033 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTATCC TATGGCTGAT GTATTCAGGG GGATTACAAT GGCAACGTTT TTTAGTCAGC
CATAAGGGCC AGCCGGTGTC ATTGATCAAA CAAGAAGACT TTATCCAGTC CATCGCTGAT
GCGCTGCAAT ACATCAGTTA CTACCATCCG GTCGATTACA TCAAGAATCT GGCTTTGGCG
TATGGGTGCG AGAAATCGCC CGCCGCTAAA GATGCAATGG CGCAGATTTT GATTAACTCA
CGTATGTGTG CTGAGGGGCG CCGCCCGATT TGCCAAGATA CAGGGATTGT CACGGTGTTC
CTTAGCATCG GGATGGATGT ACGTTGGGAT GACGTCACGA TGGATGTGGA AGAGATGGTG
AATGAGGGGG TTCGCCGTGC CTATCGTCAT CCGGATAACA CGCTACGTGC GTCTGTGCTT
GCTGATCCTG CCGGCAAGCG CTGCAATACG AGGGACAATA CGCCAGCAGT CGTTAACGTC
AAGGTTGTTT CTGGGGGCCA TGTTGAAGTG ATTGTTGCTG CCAAGGGAGG GGGATCTGAG
GCCAAGAGCA AATTTGCAAT GCTAAATCCA TCGGATTCCA TCGTTGATTG GGTTCTGGAC
ACTGTGCCAA CCATGGGGGC TGGCTGGTGC CCACCAGGGA TGCTTGGGAT TGGTATCGGT
GGTACGGCTG AGAAAGCGAT GCTGCTCGCT AAGGAAGCGT TGATGGAACC GATTGACATC
CAGGATTTGA TGGTACGCGG CCCTTCCAAT CGTGCTGAAG AATTACGCTT GGAGTTGTAC
GAGAAGGTCA ATGCTTTAGG GATCGGTGCT CAGGGGGTGG GCGGTTTGAC GACGGTATTA
GATATCAAGG TCAAAGATTA TCCAACGCAT GCTGCCAATT TGCCGGTAGC GATGATCCCT
AATTGTGCGT CCACACGCCA TGCGCATTTC ACATTGGACG GTAGCGGTCC TGTTGTTCTG
GAACCGCCGT CATTAGAGGA TTGGCCTAAG TTGAGCTATC TCCCGGAGTC TGCACGGCAG
GTGGATTTGA ATACGATCAC CAGGGATGAG GTGGCGCAGT TCAAGCCAGG TGAGGTGTTG
CTACTCAGCG GCAAATTGTT GACGGGACGA GATGCTGCGC ATAAGCGCAT CGTTGAGATG
CTCAACAAGG GGGAGACATT ACCAGTTGAT TTCACGAATC GCTTTATCTA CTACGTGGGT
CCAGTGGATC CTGTGCGTGA TGAAGTCGTC GGTCCTGCGG GTCCAACCAC AGCAACGCGT
ATGGATAAGT TTACGCGTCA GATGCTGGAG CAGGGCGGGT TGCTCGGTAT GGTGGGCAAG
GCCGAGCGTG GTCCTACTGC CATCGCTGCA ATCCGTGACA ACAAAGCCGT GTATCTGATG
GCGGTGGGAG GGGCGGCTTA TCTTGTCTCC AAGGCGATCA AAACGAGCCG GATACTGGCT
TTTGAAGACC TTGGCATGGA GGCAATTTAT GAGTTTGAAG TCAAGGAGAT GCCTGTAACA
GTGGCGGTTG ATTGCAACGG TGAGTCGATA CATACAACTG GGCCGCGTGA GTGGCGAAGC
CGGATCGGGA AAATTCCGGT TGTTGTGGAG TAG
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| Protein sequence | MFILWLMYSG GLQWQRFLVS HKGQPVSLIK QEDFIQSIAD ALQYISYYHP VDYIKNLALA
YGCEKSPAAK DAMAQILINS RMCAEGRRPI CQDTGIVTVF LSIGMDVRWD DVTMDVEEMV
NEGVRRAYRH PDNTLRASVL ADPAGKRCNT RDNTPAVVNV KVVSGGHVEV IVAAKGGGSE
AKSKFAMLNP SDSIVDWVLD TVPTMGAGWC PPGMLGIGIG GTAEKAMLLA KEALMEPIDI
QDLMVRGPSN RAEELRLELY EKVNALGIGA QGVGGLTTVL DIKVKDYPTH AANLPVAMIP
NCASTRHAHF TLDGSGPVVL EPPSLEDWPK LSYLPESARQ VDLNTITRDE VAQFKPGEVL
LLSGKLLTGR DAAHKRIVEM LNKGETLPVD FTNRFIYYVG PVDPVRDEVV GPAGPTTATR
MDKFTRQMLE QGGLLGMVGK AERGPTAIAA IRDNKAVYLM AVGGAAYLVS KAIKTSRILA
FEDLGMEAIY EFEVKEMPVT VAVDCNGESI HTTGPREWRS RIGKIPVVVE
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