| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0949 |
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| Symbol | tolB |
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| ID | 6204076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 1113990 |
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| End bp | 1115414 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641702476 |
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| Product | translocation protein TolB |
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| Protein accession | YP_001829655 |
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| Protein GI | 182681495 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.400419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGCGT TCACGCTTTT GTTGTTAACG ATTGCTAAAA TATTCGTTCT GGGGCATCCG
TTTAAATTTT CATCCATTAT TTTTCTTAAA GTTATAGATC TACACATGAC GAAATTTCCA
CGCTGGCTGG CCATGTTGGT CGGTTTATTG TTCCCCTTAT CAGCTCTGAC GCAGCAACAG
GGGTTGACGA TCGATATCGT TGGCGGCAAC ACCGCAGCGA CTCCTATTGC AGTTTTACCT
ATGCCTTATC ATGACAGTGC AGGTGCTCCA GCTACGGATG TTTCGGGTGT TGTTGCTGCT
GACTTGAACC GTTCAGGTCA GTTCCGTACG TTGCCTCTAG GGCAAATTAC TGAGCGCCCT
ACTCATGGAA GCGAGATTCG ATTTCCGACT TGGCAAGCAC TGAAACAGGA CTACATCGTG
GTTGGTCGTG TGCTTGATGC CAGGCAAGGG ACTTACCGTG TCGAGTATGA ACTATTCGAT
GTTCGCAACG GCAAACGAAT GCTTGGATTG GCGATGACTG CACGCGCTAG CGCGATGCGT
GACGTTGCAC ACCAAATGGC CGATGCAATC TACGAAAAAA TTACCGGTTT GCGCGGTGCA
TTCTTTACCC GCATTGCTTA TGTCACTGCC AGTGGTTCAC ACGGAGCAAT GCGGTACGCA
CTGATGGTTG CTGACTCAGA CGGCTACAAT CCACAAACCA TCGTGCGTTC AGCCGAACCA
CTGTTATCAC CTGATTGGAG CTCTGATGGT AAGAAACTGG CGTACGTTAG TTTTGAGAAA
GGGGGGTCTT CAATCTACAT TCAAGACATT GCTACAGGTT CCCGTGAATT GGTGTCAAGC
TTCCGGGGTA TCAATGCTGC ACCATCGTTT GCTCCCGATG GCCATCGAAT CGCTTTATCT
CTGTCAAGAA GTGGTAATCC TGAAATCTAC GTCATGGACT TGGTTAGCAA ACAGTTAATT
CAGTTGACCA ATAGTTTCGG AATTGATACT GAACCGGTTT GGTCGTCAGA TGGGAAATTT
ATTTATTTCA CTTCTGACCG CGGTGGGCGT CCACAGATAT ATAAAGTCGC CTCTGTTGGA
GGCGCAGCGA CACGTGTTAC ATTTCAAGGC AACTACAATG CTAGTGCTAG CGTCTCCTAT
GACGACAAGA AGATTGTCGT AGCACAAGGG AGCGGTAACG TATACCGAAT TGCAATGATG
GACCAAAGTT CGGGATCTAC GGTTTGGAAC ACTTTATCTA CTGGTTCATT GGATGAATCT
CCGAGCTTTG CTCCCAATGC AAGTATGGTC CTTTATGCAG CACGTGAAGG AGGCCGTGGA
GTACTTTATG CAGTCTCTGC GGATGCGCGT GTGCGCCAGC GCCTAGTATC GGTTGATAGT
GATGTAAGAG AGCCTGCTTG GGGGCCTTAC CGGAGCGTAC ATTAA
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| Protein sequence | MAAFTLLLLT IAKIFVLGHP FKFSSIIFLK VIDLHMTKFP RWLAMLVGLL FPLSALTQQQ
GLTIDIVGGN TAATPIAVLP MPYHDSAGAP ATDVSGVVAA DLNRSGQFRT LPLGQITERP
THGSEIRFPT WQALKQDYIV VGRVLDARQG TYRVEYELFD VRNGKRMLGL AMTARASAMR
DVAHQMADAI YEKITGLRGA FFTRIAYVTA SGSHGAMRYA LMVADSDGYN PQTIVRSAEP
LLSPDWSSDG KKLAYVSFEK GGSSIYIQDI ATGSRELVSS FRGINAAPSF APDGHRIALS
LSRSGNPEIY VMDLVSKQLI QLTNSFGIDT EPVWSSDGKF IYFTSDRGGR PQIYKVASVG
GAATRVTFQG NYNASASVSY DDKKIVVAQG SGNVYRIAMM DQSSGSTVWN TLSTGSLDES
PSFAPNASMV LYAAREGGRG VLYAVSADAR VRQRLVSVDS DVREPAWGPY RSVH
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