| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0885 |
|---|
| Symbol | |
|---|
| ID | 6203612 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 1046307 |
|---|
| End bp | 1047212 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641702415 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001829594 |
|---|
| Protein GI | 182681434 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTATC ACGATTACCC CTTTCTCTCG CAGTGTTTTG AGGTCCGTCC GGGAATCAGG
ATGCGTTATC TGGACGAAGG TCCGCGTGAC GCAGCGGTGG TGGTCATGCT GCATGGCAAT
CCTTCGTGGA GTTATTACTG GCGTCACTTG GTGGCAGCGT TGCGTGATGG GTATCGTTGT
ATCGTTCCGG ATCACATTGG TATGGGGCTG TCAGATAAGC CGGGGGACGC GCCGGGTGTG
GTGCCACGTT ACGATTACAC GTTGCAATCT CGCGTGGATG ATTTGGATGC GTTGTTGCGT
CATGTGGGTA TTGACGATGT CACGCCGTTG ACGCTGGCAG TACACGATTG GGGGGGCATG
ATCGGGTTTG GCTGGGCGTT GGCGCATGCT GTGCAAGTGC GGCGCTTGGT GATTACCAAC
ACGGCAGTAT TTCCGATGCC GATGTCTAAG AAGATGCCGT GGCAGATTGC CTTGGGGCGT
GATTGGAGGT TTGGTGAATG GATGGTTCGT GGGTTGAATG CTTTTGCACT GGGTGCGGCC
TGGTTGGGGG TGGAAACACG GTTGCCGCGT GCGGTGCGCC GTGCCTATTT GGCACCCTAT
AACAGTTGGG CCAATCGGAT TTCGATCATC CGTTTTATGC AGGATATTCC GTGTGCTCCA
GGTGATCGTG CTTGGCCGTT GTTAGAGGCT ACCGGCAAGG CACTGCCCAA CTTTGCTGAT
CGTCCTGCGT TCATTGGTTG GGGGATGCAG GATATTGTGT TTGATCATCA TTTTTTGGAT
GAATTCTGCG CTGCTTTGCC GGGTGCGCAG GTGCAAGTTT TTGATGATGC CGGTCACTAT
GTTCTGGAAG ATAAGAGCAG TGTCCTGGTG CCGGCGATTC GTGCGTTTCT TGATGCGCAC
CCATAG
|
|---|
| Protein sequence | MSYHDYPFLS QCFEVRPGIR MRYLDEGPRD AAVVVMLHGN PSWSYYWRHL VAALRDGYRC
IVPDHIGMGL SDKPGDAPGV VPRYDYTLQS RVDDLDALLR HVGIDDVTPL TLAVHDWGGM
IGFGWALAHA VQVRRLVITN TAVFPMPMSK KMPWQIALGR DWRFGEWMVR GLNAFALGAA
WLGVETRLPR AVRRAYLAPY NSWANRISII RFMQDIPCAP GDRAWPLLEA TGKALPNFAD
RPAFIGWGMQ DIVFDHHFLD EFCAALPGAQ VQVFDDAGHY VLEDKSSVLV PAIRAFLDAH
P
|
|---|
| |