| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0879 |
|---|
| Symbol | |
|---|
| ID | 6202117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 1039132 |
|---|
| End bp | 1039599 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641702409 |
|---|
| Product | tRNA/rRNA methyltransferase (SpoU) |
|---|
| Protein accession | YP_001829588 |
|---|
| Protein GI | 182681428 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
|---|
| TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATGC CTCTCTACGA TGTGCTGCTG TACCAGCCCG AAATACCCCC CAACACCGGC
AATGTCATCC GCCTGTGTGC CAATACTGGC GCGCGGCTAC ATTTGATCGA ACCACTCGGT
TTTGATCTGG ATGACCGGCA ACTCAAGCGT GCTGGATTGG ACTATCACGA ATACGCCCGG
ATGCAGGTAC ATCCCAACCT GAGCAGTGCA CTGGCTGCAA TCGCACCACG ACGCCTATTT
GCGCTCAGTA CACGTGGCCA AGTGCGCTAT GACACCCCGA CTTTCCGCAC GGGAGATGCT
TTTATTTTCG GTCCGGAAAC CCGCGGTTTG CCAGACACTG TGTTGCATAC CATCCCGGAG
TCTCAACGCC TGTATTTACC GATGCAACCA CAAAGCCGCA GCTTAAACCT CTCCAATGCC
GTCGCGGTGA TGGTATTTGA GGCATGGCGG CAACAGGGTT TTCAATGA
|
|---|
| Protein sequence | MSMPLYDVLL YQPEIPPNTG NVIRLCANTG ARLHLIEPLG FDLDDRQLKR AGLDYHEYAR
MQVHPNLSSA LAAIAPRRLF ALSTRGQVRY DTPTFRTGDA FIFGPETRGL PDTVLHTIPE
SQRLYLPMQP QSRSLNLSNA VAVMVFEAWR QQGFQ
|
|---|
| |