| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0828 |
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| Symbol | |
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| ID | 6203290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 976282 |
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| End bp | 977472 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641702360 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001829540 |
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| Protein GI | 182681380 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGTCC CGTTACGCGT ACTCGGCTTG GTCTACACCG TCTTACTAGC ACTTACCGCA
TGCAGTAAGT CCGAACAGCC GCAGATGCCA ACACCAGAAG TTAGTATCGT CGAAGCAAAG
CCGCAAACAA CTCCCATACA ACTTGATTTA GTCGGACGTC TATCGGCATA CCGCTCCGCA
GACGTACGCG CACGGGTGGC TGGAATATTA CAAAAGCGGA TATACACCGA AGGCACCGAA
GTAAAAGAAG GTCAGCCGCT GTTCCAAATC GACCCTGCGC CATTTCAAGC CACGCTATTA
GAAGCGCAAG GCCGTTTAGC TGCAGCAGAA GCCACGTATA AAAATGCCAA AATCGTCGCT
GACCGCGCCC GCCGCTTGTC CCCTGAGCAA TACATTTCGC GCTCGGATGT AGACAATGCC
GAGGCAGCAG AACGCACGGC AGCCGCCAGT GTCGAACAAG CACGCGCCGC AATGCAGAGC
GCACGCATCA ACCTCAATTA CGCCAACGTC ACTGCCCCAA TCAGCGGTCT TGCTGGCCAA
CAGCGAGTCA CTGAAGGAGC TTTAGTTGGA TCTGGGAGCA GCACCCTACT CACAACCGTT
GATCAAATTG ATCCGTTGTA CGTGAACTTC TCAATGAGCA ATGATGAGTT GATGCAACTA
CGCCAAGCAC AGCACCAGGG AAGTGTGCAA TTGAGTAGCG ACAATACATC GACCATCGAC
GTACTCCTCA GTGATGGCAG CAAATATCCA CACCAAGGGA CATTGGATTT CTCCGGAGCA
ACTGTTGATC CGAGCACCGG CACAGTCTCA CTGCGTGCAG TGCTTCCAAA TACTGATCAT
CTCCTGATGC CAGGAGCCTT TGTCACATTT AAAGCCAACC TCGGCCAGCG CAACAATACG
ATCCTGCTAC CCGGCGCAGG GGTGCAACGT GATGCGAACA GCGCTTACGT CCTGGTGATA
GACAAAGATG GCAAGGTCAT CCGCAAGAAC GTGACCACGA CAGGGATGAA AGATAACCAG
TGGTTGATTA CTGCTGGACT CTCCAGCGGA GACCGTGTGA TCGTTGATGG TCTCCAGAAA
GTCAAAGAAG GCGCTCCGGC CAAGGGCATC CCCTGGAAAC CAGATCCCAT TTCCAGCAGC
GCACACGCAG CAGCCAAGAC ACCCACTCAC ACCGCTAAGA CCGAACAATA A
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| Protein sequence | MTVPLRVLGL VYTVLLALTA CSKSEQPQMP TPEVSIVEAK PQTTPIQLDL VGRLSAYRSA
DVRARVAGIL QKRIYTEGTE VKEGQPLFQI DPAPFQATLL EAQGRLAAAE ATYKNAKIVA
DRARRLSPEQ YISRSDVDNA EAAERTAAAS VEQARAAMQS ARINLNYANV TAPISGLAGQ
QRVTEGALVG SGSSTLLTTV DQIDPLYVNF SMSNDELMQL RQAQHQGSVQ LSSDNTSTID
VLLSDGSKYP HQGTLDFSGA TVDPSTGTVS LRAVLPNTDH LLMPGAFVTF KANLGQRNNT
ILLPGAGVQR DANSAYVLVI DKDGKVIRKN VTTTGMKDNQ WLITAGLSSG DRVIVDGLQK
VKEGAPAKGI PWKPDPISSS AHAAAKTPTH TAKTEQ
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