| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0804 |
|---|
| Symbol | |
|---|
| ID | 6202079 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 951001 |
|---|
| End bp | 952269 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641702336 |
|---|
| Product | cupin 4 family protein |
|---|
| Protein accession | YP_001829517 |
|---|
| Protein GI | 182681357 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2850] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTT CCGTCTCTTT ATTCCCGTTT GAAATTCAAG CAACCGATCA ATATCCATTA
GGCATGCCGG AGGAATATTT CCTGCATCAC TATTGGCAAA AGCGCCCACT GCTGATCCGC
AACGCGTTTC CTGACTTCCA CAGCCCAGTG ACTCCCGAGG ATCTCGCCGG ACTGGCTTGC
GAAGAGGGTG TTCTCTGCCG CCTGGTCCGG CACAACCGCA ACACCGACAC CTGGGAGGTA
CGTCACGGAC CTTTCCAAGA AGAGGAATTT CCCAAACTGC CTGACCATGA TTGGACCCTG
CTGGTCCAGG ATGTAGATAA GTGGGACCAA GATGTGCGCG CACTCCTGGA ACATTTCCGC
TTTCTGCCAC GCTGGCGGAT CGATGACATC ATGATTAGCT TCGCCGCCAC TCACGGCTCG
GTTGGTGCGC ATGTCGACCA ATACGATGTT TTCCTACTCC AGGGCCAAGG GCATCGCCAT
TGGCACATCG ACGCCAGCGT CGCGATGGGT CGCAAGGCAC CGCCTCTGGA TTTCCGCAAT
GACGTAGACA TCAAATTGCT GCGCCAATTT ACTCCAACTC ACGAATGGGT GTTGGCACCT
GGTGACATGC TCTACTTGCC GCCACTGGTC CCACATCACG GGGTCGCCGA TGATCCATGT
TTGACTTACT CGTTGGGCAT GCGTGCTCCA TCTTCAGCCG AGTTAATTAG CGACTGGCTG
GACACACTCA TCAGTGAGGC GGACGAGGCA GTACGTTACC AAGATGCAGA CCTCACACGA
CCCGAGGACC CCTACGAAAT CGACGCCGCC GCGATGGATC GTGCGATCGC TGCTCTGAAT
GCATTGAGGA TGCACGAGGA TCCGGAGCAA CTCGGCAATT GGTTCGGCCG TTTCATCACC
ACTTACCGCA GCTCCAACAC GATCGTGCCT TACACGACAA CACCACAGCG TGAGACGTTA
GAACATGCCC TTGCCAGCGG TAGTGAACTC ATACGTCATC CGTGGTCGCG TACCGCTTGG
CGCCGTGCCA GCCGCGATGC CACATTGTTC TGTAGTGGCC TGGAATTCAC ACTTACATCT
CAGGATGCAC AACGCTTGGC CGCCGCCGAA CGCATCGACA TCCACGTTTA CACAGCACTC
TCCGAACGCG GCCGCGCCGC ATTATTCGAT CTCGTGGGGC AAGGCCACTA CCAACTTGAT
GACAACACTC TGGACAACGA CGCAAGGAAC AAGGAAGCCT CCTCCGCGAC AGCCTGTCCC
GAAGACTGA
|
|---|
| Protein sequence | MKRSVSLFPF EIQATDQYPL GMPEEYFLHH YWQKRPLLIR NAFPDFHSPV TPEDLAGLAC
EEGVLCRLVR HNRNTDTWEV RHGPFQEEEF PKLPDHDWTL LVQDVDKWDQ DVRALLEHFR
FLPRWRIDDI MISFAATHGS VGAHVDQYDV FLLQGQGHRH WHIDASVAMG RKAPPLDFRN
DVDIKLLRQF TPTHEWVLAP GDMLYLPPLV PHHGVADDPC LTYSLGMRAP SSAELISDWL
DTLISEADEA VRYQDADLTR PEDPYEIDAA AMDRAIAALN ALRMHEDPEQ LGNWFGRFIT
TYRSSNTIVP YTTTPQRETL EHALASGSEL IRHPWSRTAW RRASRDATLF CSGLEFTLTS
QDAQRLAAAE RIDIHVYTAL SERGRAALFD LVGQGHYQLD DNTLDNDARN KEASSATACP
ED
|
|---|
| |