Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0780 |
Symbol | |
ID | 6203932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 920877 |
End bp | 928391 |
Gene Length | 7515 bp |
Protein Length | 2504 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641702312 |
Product | hypothetical protein |
Protein accession | YP_001829493 |
Protein GI | 182681333 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport [W] Extracellular structures |
COG ID | [COG5295] Autotransporter adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.544411 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTATTTA TAGCTCCACA TAGTAGTAAA CAGCATGGGA AGGAACCGCT GCATACTATT TTATTTGCTG CGTTGTCGCT GTCGCTTCCA TATGCTGAAG AGGCTAGAGC CCAACTTTAT ATCAATGATG GTATTGATGG GCAATGTCAG AGGATCGTTG ATTTTGGAAA CACGACCATT GAGTCGAAAA CTTCCCCCCT ATGCAATGAA GATCCGTGGA CTGTGACAGG TTACGCTCGT TTCTTCGGTG CCCCTGGAGC CACTGCTGAC CAGGGGAACG CATCAAGAAG TCTTGCGCTG GGTGGGGTTT TATATGTCAA TTCGGGTCAA TTCGGTGTTA ATGACGTTTT AAATAAAACG TATTCGATCC GTATGGGCAG TGTGATAACC ATGAACACTA TGGCGGGAAC CAACGCAATT GCGATTGGTT CGGCGCAGAG TAGTGCGGCT GATGCACTGA AAGCGAGCTT GGCAACCAAA GCAACTGGTG CACGCGCAAT TGCAATTGGT GCAAAGGCGT CTGCCGATGG TACCGATACA GTGGCATTAG GGTCTGGAGC AACGGCGGGT ACGGGTGCTT CTTCGGTTGC TATTGGTCTT AATGCCTCGG CAGTCAATGG TGCCGTTGCG GTTGGTGGGG GTGCGCTGGT TACAGTACCA GATGGAGCGG TGGCATTGGG ATTGAACTCG GTTGCTTCTA CTGGCAAGGG CCTCTCAGGG TACGACCCAA AAACAAAAAC GATTTCCACT GACGCTTCAG CGGCCTGGAA AAGCACACTG GCAGCAGTCA GTATCGGCGA TGTATCTAGT AGCAATTTTA AGACGCGTCA GCTCTCAGGT TTGGCGGCAG GCACATCAAA TACCGATGCA GTGAATGTTG CTCAGCTTAA GGTCGTTGAC GAGATTGCCA GTAAAGGCTG GAACCTTACG GCGTCCGGGG CCAACAGTGG CAACGTAGGT CCAGGAAGTT CAGTGGACCT GAAAAACACC GACAAAAATC TGACGATTAC AAAAGCGATC GGAAGTAATG ATGTGGAATT CAATTTGAAC AAGGATGTCA AAGTTACAAC ATTGGCTGTT GGTGATGCTT TGCTGAATAC CGATGGGATC GCGTTAGGCA CTGATGTTGC ATTGGGTACG ACGGGTTTGA CGATTACCAA TGGTCCTGCG GTGACTGCAT CGGGTATTGA TGCGGGCAGC AAGGTGATTA GCCATGTTGC GGCGGGTGAG GTGTCGGAGA CGTCGACGGA TGCGGTGAAC GGCTCGCAGT TGAATGCAGT GCAAGTGCAA GCCAGTCAGC CGGTAACGTT TAGTGGAAAC GAAGGGTCGG TGAAACGTAG CCTAGGTCAG GCGGTGGTGA TCAGTGGCGA GAGCAGTACT GCGGGGACGT ATTCAGGTGG GAATTTAAAG AGTGTGGTGG ATGAAGCAGC TGGTGCGATT CATTTACAAC TGGCGGATTC TCCGAAGTTT GGCAATGTGG TGATCAACAA CGGCGGCAAG ATCAGCGGGT TGACGGCAGG GACAGAGGAT ACGGATGCGG TCAACTTGAG TCAGTTGAAG TCGATCAGCG ATACGGTGGA TAAGGGGTGG ACGCTGACGG CGTCAGGTGC CAATGGGAGC AAAGTGGTCT CTGGCGGTGC GGTGGACCTG AAGAACACAG ATGGGAATCT GACGATCAGC AAATCCGGTG ATAGCAATGA TGTGGTGTTT AACCTGTCCA AGGATTTCAA AGTGGATGGG ATGACCTCAG GCACCACGGT CGTGAATAAC GATGGCGTGA AGGTAGGCAC TGATGTTGCG TTAGGTACGA CGGGTTTGAC GATTGCCAAT GGTCCTGCGG TGACTGCATC GGGTATTGAT GCGGGCAGCA AGGTGATTAG CCATGTTGCG GCCGGTGAGG TGTCAGAGAC GTCGACGGAT GCGGTGAACG GCTCGCAGTT GAATGCAGTG CAAGCGCAAG CCAGTCAGCC GGTAACGTTT AGTGGAAACG AAGGCTCGGT GAAACGGACC CTGGGTCAGG CGGTGGTGAT TAGTGGTGAA AGTAGTACTG CGGGGACGTA TTCAGGTGGG AATTTAAAGA GTGTGGTGGA TGAAGCAGCT GGTGCGATTC ATTTACAACT GGCGGATTCT CCGAAGTTTG GCAATGTGTT GATCAACAAC GGCGGCAAGA TCAGCGGGTT GACAGCAGGG ACAGAGGATA CGGATGCGGT CAACTTGAGT CAGTTGAAGT CGATCAGCGA TACGGTGGAT AAGGGGTGGA CGCTGACAGC GTCAGGTGCC AATGGGAGCA AAGTGGTCTC TGGCGGTGCG GTGGACCTGA AGAACACAGA TGGGAATCTG ACGATCAGCA AATCCGGTGA TAGCAATGAT GTGGTGTTTA ACCTGTCCAA GGATTTCAAA GTGGATGGGA TGACCTCAGG CACCACGGTC GTGAATAACG ATGGCGTGAA GGTCGGTAGC GATGTTGCGT TAGGTACGAC GGGTTTGACG ATTACCAATG GTCCTGCGGT GACTGCATCG GGTATTGATG CAGGCAGCAA GGTGATTAGC CATGTGGCGG CCGGTGAGGT GTCAGAGACG TCGACGGATG CGGTGAACGG CTCGCAGTTG AATGCAGTGC AAGCGCAAGC CAGTCAGCCG GTAACGTTTA GTGGAAACGA AGGCTCGGTG AAACGGACCC TGGGTCAGGC GGTGGTGATT AGTGGTGAAA GCAGTACTGC GGGGACGTAT TCAGGTGGGA ATTTAAAGAG TGTGGTGGAT GAAGCAGCTG GTGCGATTCA TTTACAACTG GCGGATTCTC CGAAGTTTGG CAATGTGTTG ATCAACAACG GCGGCAAGAT TAGCGGGCTT ACGGCAGGGA CAGAGGATAC GGATGCGGTC AACTTGAGTC AGTTGAAGTC GATCAGCGAT ACGGTGGATA AGGGGTGGAC GCTGACAGCG TCAGGTGCCA ATGGGAGCAA AGTGGTCTCT GGCGGTGCGG TGGACCTGAA GAACACAGAT GGGAATCTGA CGATCAGCAA ATCCGGTGAT AGCAATGATG TGGTGTTTAA CCTGTCCAAG GATTTCAAAG TGGATGGGAT GACCTCAGGC ACCACGGTCG TGAATAACGA TGGCGTGAAG GTAGGCACTG ATGTTGCGTT AGGTACGACG GGTTTGACGA TTGCCAATGG TCCTGCGGTG ACTGCATCGG GTATTGATGC GGGCAGCAAG GTGATTAGCC ATGTTGCGGC CGGTGAGGTG TCGGAGACGT CGACGGATGC GGTGAACGGC TCGCAGTTGA ATGCAGTGCA AGCGCAAGCC AGTCAGCCGG TAACGTTTAG TGGAAACGAA GGCTCGGTGA AACGGACCCT GGGTCAGGCG GTGGTGATTA GTGGTGAAAG CAGTACTGCG GGGACGTATT CAGGTGGGAA TTTAAAGAGT GTGGTGGATG AAGCAGCTGG TGCGATTCAT TTACAACTGG CGGATTCTCC GAAGTTTGGC AATGTGGTGA TCAACAACGG CGGCAAGATT AGCGGGCTTA CGGCAGGGAC AGAGGATACG GATGCGGTCA ACTTGAGTCA GTTGAAGTCG ATCAGCGATA CGGTGGATAA GGGGTGGACG CTGACAGCGT CAGGTGCCAA TGGGAGCAAA GTGGTCTCTG GCGGTGCGGT GGACCTGAAG AACACAGATG GGAATCTGAC GATCAGCAAA TCCGGTGATA GCAATGATGT GGTGTTTAAC CTGTCCAAGG ATTTCAAAGT GGATGGGATG ACCTCAGGCA CCACGGTCGT GAATAACGAT GGCGTGAAGG TAGGCACTGA TGTTGCGTTA GGTACGACGG GTTTGACGAT TGCCAATGGT CCTGCGGTGA CTGCATCGGG TATTGATGCG GGCAGCAAGG TGATTAGCCA TGTTGCGGCC GGTGAGGTGT CGGAGACGTC GACGGATGCG GTGAACGGCT CGCAGTTGAA TGCAGTGCAA GCGCAAGCCA GTCAGCCGGT AACGTTTAGT GGAAACGAAG GCTCGGTGAA ACGGACCCTG GGTCAGGCGG TGGTGATTAG TGGTGAAAGC AGTACTGCGG GGACGTATTC AGGTGGGAAT TTGAAGAGTG TGGTGGATGA AGCAGCTGGT GCGATTCATT TACAACTGGC GGATTCTCCG AAGTTTGGCA ATGTGTTGAT CAACAACGGC GGCAAGATTA GCGGGTTGAC GGCAGGGACA GAGGATACGG ATGCGGTCAA CTTGAGTCAG TTGAAGTCGA TCAGCGATAC GGTGGATAAG GGGTGGACGC TGACAGCGTC AGGTGCCAAT GGGAGCAAAG TGGTCTCTGG CGGTGCGGTG GACCTGAAGA ACACAGATGG GAATCTGACG ATCAGCAAAT CCGGTGATAG CAATGATGTG GTGTTTAACC TGTCCAAGGA TTTCAAAGTG GATGGGATGA CCTCAGGCAC CACGGTCGTG AATAACGATG GCGTGAAGGT CGGTAGCGAT GTTGCGTTAG GTACGACGGG TTTGACGATT ACCAATGGTC CTGCGGTGAC TGCATCGGGT ATTGATGCGG GCAGCAAGGT GATTAGCCAT GTGGCGGCCG GTGAGGTGTC AGAGACGTCG ACGGATGCGG TGAACGGCTC GCAGTTGAAT GCAGTGCAAG CGCAAGCCAG TCAGCCGGTA ACGTTTAGTG GAAACGAAGG CTCGGTGAAA CGGACCCTAG GTCAGGCGGT GGTGATCAGT GGCGAGAGCA GTACTGCGGG GACGTATTCA GGTGGGAATT TGAAGAGTGT GGTGGATGAA GCAGCTGGTG CGATTCATTT ACAACTGGCG GATTCTCCGA AGTTTGGCAA TGTGTTGATC AACAACGGCG GCAAGATTAG CGGGCTGACG GCAGGGACAG AGGATACGGA TGCGGTCAAC TTGAGTCAGT TGAAGTCGAT CAGCGATACG GTGGATAAGG GGTGGACGCT GACAGCGTCA GGTGCCAATG GGAGCAAAGT GGTCTCTGGC GGTGCGGTGG ACCTGAAGAA CACAGATGGG AATCTGACGA TCAGCAAATC CGGTGATAGC AATGATGTGG TGTTTAACCT GTCCAAGGAT TTCAAAGTGG ATGGGATGAC CTCAGGCACC ACGGTCGTGA ATAACGATGG CGTGAAGGTC GGTAGCGATG TTGCGTTAGG TACGACGGGT TTGACGATTA CCAATGGTCC TGCGGTGACT GCATCGGGTA TTGATGCAGG CAGCAAGGTG ATTAGCCATG TGGCGGCCGG TGAGGTGTCA GAGACGTCGA CGGATGCGGT GAACGGCTCG CAGTTGAATG CAGTGCAAGC GCAAGCCAGT CAGCCGGTAA CGTTTAGTGG AAACGAAGGC TCGGTGAAAC GGACCCTGGG TCAGGCGGTG GTGATTAGTG GTGAAAGCAG TACTGCGGGG ACGTATTCAG GTGGGAATTT AAAGAGTGTG GTGGATGAAG CAGCTGGTGC GATTCATTTA CAACTGGCGG ATTCTCCGAA GTTTGGCAAT GTGTTGATCA ACAACGGCGG CAAGATTAGC GGGCTTACGG CAGGGACAGA GGATACGGAT GCGGTCAACT TGAGTCAGTT GAAGTCGATC AGCGATACGG TGGATAAGGG GTGGACGCTG ACAGCGTCAG GTGCCAATGG GAGCAAAGTG GTCTCTGGTG GTGCGGTGGA CCTGAAGAAC ACAGATGGGA ATCTGACGAT CAGCAAATCC GGTGATAGCA ATGATGTGGT GTTTAACTTG TCTGAGGATC TTAAGGAGAA AAGTGTAACG GTGGGTAACA CTCAGCTGGA CAAGGATGGG GTGAAGGTGA GCAGTGATGT TTTGCTGAAT TCTAAGTCGT TAGTGATTAT GAGCCATTCA TCCACTTCAT CTGTCAAGAC TTTGGAAGAT GGAGAAAGTG TTGTTAACAG GACGGTTGTG AATGGCGATG GTGTGAATAT TGATGATGTT GTTGTTGTTA ATGATCTTGG GTTATCAATT GTCGGTGGGG CGTCGGTTAC GTTGAGTGGT ATCAATGCTG GCAGCCATAA GATCACTAAT GTGACGGCAG GGACGGAGGA TACGGATGCG GTCAACTTGA GTCAGTTGAA GTCGGTCAGC GAGGCGGTTG ATAAGGGGTG GACGTTGACG GCGTCGGGTG CCAATGGGAG CAGTGTGGTG TCTGGCGGTA CGGTGGATCT GAAGAATACG GATGGGAATC TGACGATCAG TAAATCCAGC GATAGCAATG ATGTGGTGTT TAACCTGTCC AAGGATTTCA AAGTGGATGG GGTGACTGCA GGCAATACTG TGGTGAACAC CGATGGTGTG AAGGTGGGTA GCGATGTTTC GTTGGGTGCA ATGGGATTAT TCATTGCTAA TGGACCTTCG GTGACGGCTT CAGGGTTCAA TGCGGGTGAC AAAGTCATCA GCCATGTTGC AGTGGGTATG GCAGATACAG ATGCGGTTAA CGTCAGTCAA TTGAAGCAGG CAGTACAGAA TGTGAGTGTC AAAGCGACTC GCTATTACAG TACGAATGAT GGTGGCACCC AGGGAGGTAA CTATGATGGT GATGGTGCGA CAGGCAGTAA GGCTGTCGCG GCCGGTGTTG GTACGCAGGC ATCTGGTGAA GGGGCGACAG CGGTGGGATC TGGTGCTGCT TCGAGTGGCA AAGGTTCTAC GGCGATTGGC CGTAATGCGA TTGCTAGTGC TGATGGCAGT GTGGCTTTGG GTGATGGTGC AAAGGATGGT GGGCGTGGTG CAGAAAGTTA CACTGGGAAA TATTCAGGTG TACAGAACAA TACGATGGGA ACTGTTTCGG TAGGTGATGC TGCTAAGGGG GAAACCCGTT CGATCAGTAA TGTGGCTGAT GCTAAGGAGG AGACGGATGC GGTGAATTTG CGCCAGCTTG ATGCTGTGGC CCAGAAGTCA AATCTTCAAA CGGATGATAT GAGGCATGAG ATCAATAATA TAGAGGATGT TTTTAAGGTC ACTAAAGGTG ACAGTACTCC AAGTGTTAAA GGGATGGGGG TCAATGCGAT GGCCATTGGT ACCAATGCTG CAGTTTCAGG TACAGATAGT GTTGCGTTGG GTAAGAATAC GAATGTGTCT GCTGATAATG CGGTTGCTAT TGGTAATGAT TCAGTAGCTG ACCGCGCAAA CAGTGTTTCG GTGGGATCTG CGGGTTCTCA GAGGCAGGTG ACGAATGTGG CTGCAGGCAC TGCTGATACG GATGCGGTCA ATGTAAGTCA ACTCAATCAA GGCTTGATCA CTGCCAAGCA GTACACGGAT GGGATGGTAG GGAATCTCCG TAGGGAGACT AACGGGGGTG TGGCCGCAGC GATTGCGACG GCAAATCTCC CGCAGGCTTA TGTTCAGGGA CGAGGGATGA CCTCTGTTGG AGTCAGTAGT TATCAGGGTC AGTCGGCGAT TGCGGTGGGT GTTTCAGCGG TTTCTGACAG TGGGCATTGG GTGTTCAAGT TCAGTGGTAG TGCGAATACC CGTAGTCACG TGGGTGTAGG TGCAGGTGTG GGTTATCAGT GGTGA
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Protein sequence | MVFIAPHSSK QHGKEPLHTI LFAALSLSLP YAEEARAQLY INDGIDGQCQ RIVDFGNTTI ESKTSPLCNE DPWTVTGYAR FFGAPGATAD QGNASRSLAL GGVLYVNSGQ FGVNDVLNKT YSIRMGSVIT MNTMAGTNAI AIGSAQSSAA DALKASLATK ATGARAIAIG AKASADGTDT VALGSGATAG TGASSVAIGL NASAVNGAVA VGGGALVTVP DGAVALGLNS VASTGKGLSG YDPKTKTIST DASAAWKSTL AAVSIGDVSS SNFKTRQLSG LAAGTSNTDA VNVAQLKVVD EIASKGWNLT ASGANSGNVG PGSSVDLKNT DKNLTITKAI GSNDVEFNLN KDVKVTTLAV GDALLNTDGI ALGTDVALGT TGLTITNGPA VTASGIDAGS KVISHVAAGE VSETSTDAVN GSQLNAVQVQ ASQPVTFSGN EGSVKRSLGQ AVVISGESST AGTYSGGNLK SVVDEAAGAI HLQLADSPKF GNVVINNGGK ISGLTAGTED TDAVNLSQLK SISDTVDKGW TLTASGANGS KVVSGGAVDL KNTDGNLTIS KSGDSNDVVF NLSKDFKVDG MTSGTTVVNN DGVKVGTDVA LGTTGLTIAN GPAVTASGID AGSKVISHVA AGEVSETSTD AVNGSQLNAV QAQASQPVTF SGNEGSVKRT LGQAVVISGE SSTAGTYSGG NLKSVVDEAA GAIHLQLADS PKFGNVLINN GGKISGLTAG TEDTDAVNLS QLKSISDTVD KGWTLTASGA NGSKVVSGGA VDLKNTDGNL TISKSGDSND VVFNLSKDFK VDGMTSGTTV VNNDGVKVGS DVALGTTGLT ITNGPAVTAS GIDAGSKVIS HVAAGEVSET STDAVNGSQL NAVQAQASQP VTFSGNEGSV KRTLGQAVVI SGESSTAGTY SGGNLKSVVD EAAGAIHLQL ADSPKFGNVL INNGGKISGL TAGTEDTDAV NLSQLKSISD TVDKGWTLTA SGANGSKVVS GGAVDLKNTD GNLTISKSGD SNDVVFNLSK DFKVDGMTSG TTVVNNDGVK VGTDVALGTT GLTIANGPAV TASGIDAGSK VISHVAAGEV SETSTDAVNG SQLNAVQAQA SQPVTFSGNE GSVKRTLGQA VVISGESSTA GTYSGGNLKS VVDEAAGAIH LQLADSPKFG NVVINNGGKI SGLTAGTEDT DAVNLSQLKS ISDTVDKGWT LTASGANGSK VVSGGAVDLK NTDGNLTISK SGDSNDVVFN LSKDFKVDGM TSGTTVVNND GVKVGTDVAL GTTGLTIANG PAVTASGIDA GSKVISHVAA GEVSETSTDA VNGSQLNAVQ AQASQPVTFS GNEGSVKRTL GQAVVISGES STAGTYSGGN LKSVVDEAAG AIHLQLADSP KFGNVLINNG GKISGLTAGT EDTDAVNLSQ LKSISDTVDK GWTLTASGAN GSKVVSGGAV DLKNTDGNLT ISKSGDSNDV VFNLSKDFKV DGMTSGTTVV NNDGVKVGSD VALGTTGLTI TNGPAVTASG IDAGSKVISH VAAGEVSETS TDAVNGSQLN AVQAQASQPV TFSGNEGSVK RTLGQAVVIS GESSTAGTYS GGNLKSVVDE AAGAIHLQLA DSPKFGNVLI NNGGKISGLT AGTEDTDAVN LSQLKSISDT VDKGWTLTAS GANGSKVVSG GAVDLKNTDG NLTISKSGDS NDVVFNLSKD FKVDGMTSGT TVVNNDGVKV GSDVALGTTG LTITNGPAVT ASGIDAGSKV ISHVAAGEVS ETSTDAVNGS QLNAVQAQAS QPVTFSGNEG SVKRTLGQAV VISGESSTAG TYSGGNLKSV VDEAAGAIHL QLADSPKFGN VLINNGGKIS GLTAGTEDTD AVNLSQLKSI SDTVDKGWTL TASGANGSKV VSGGAVDLKN TDGNLTISKS GDSNDVVFNL SEDLKEKSVT VGNTQLDKDG VKVSSDVLLN SKSLVIMSHS STSSVKTLED GESVVNRTVV NGDGVNIDDV VVVNDLGLSI VGGASVTLSG INAGSHKITN VTAGTEDTDA VNLSQLKSVS EAVDKGWTLT ASGANGSSVV SGGTVDLKNT DGNLTISKSS DSNDVVFNLS KDFKVDGVTA GNTVVNTDGV KVGSDVSLGA MGLFIANGPS VTASGFNAGD KVISHVAVGM ADTDAVNVSQ LKQAVQNVSV KATRYYSTND GGTQGGNYDG DGATGSKAVA AGVGTQASGE GATAVGSGAA SSGKGSTAIG RNAIASADGS VALGDGAKDG GRGAESYTGK YSGVQNNTMG TVSVGDAAKG ETRSISNVAD AKEETDAVNL RQLDAVAQKS NLQTDDMRHE INNIEDVFKV TKGDSTPSVK GMGVNAMAIG TNAAVSGTDS VALGKNTNVS ADNAVAIGND SVADRANSVS VGSAGSQRQV TNVAAGTADT DAVNVSQLNQ GLITAKQYTD GMVGNLRRET NGGVAAAIAT ANLPQAYVQG RGMTSVGVSS YQGQSAIAVG VSAVSDSGHW VFKFSGSANT RSHVGVGAGV GYQW
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