Gene XfasM23_0779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_0779 
Symbol 
ID6203263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp917750 
End bp920077 
Gene Length2328 bp 
Protein Length775 aa 
Translation table11 
GC content53% 
IMG OID641702311 
Productgeneral secretion pathway protein D 
Protein accessionYP_001829492 
Protein GI182681332 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1450] Type II secretory pathway, component PulD 
TIGRFAM ID[TIGR02517] general secretion pathway protein D 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00261901 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTCGC GTCTTTTAAC TGTTTCGATA GTCACTGCCC TTTTGGGTTC TTGTGTTACC 
CCACCATCGC CGATGATTAA GCGGAATACT CTTCTGCATA AACATCCTGC TACTGCAGAC
ATACCGACGA CACAGCTCCC TGACGCTGTG GGGACGGCCA CTGTGCCGCT GCCTGACACT
ACGGAGACGC CGAATGCGCT GCTTTCTGAT GCTGGTGGCC CGCTCCCGGT GATTCGTCGT
GGTAATGGGG AAGTGATTAA TCAGACTGTT GCTGCAACTC CACCGCCATC AATGGGTGTG
GCTGGAAAAG GTAGCGCTAT CTTTAACTTC GAAGGAGAGT CGTTGCAGGC TGTGGTCAAA
GCCATTCTTG GCGACATGCT AGGGCAAAAC TATTTCATTG CATCGGGTGT GCAGGGCACG
GTGACTCTTT CCACACCTAA GCCTGTCTCG TCGGCACAGG CGCTGAGTCT CTTGGAGATG
GTATTGGGTT GGAACAACGC ACGGATGATT TATAACAATG GACGTTACAG CATTGTCCAG
GCCGACCAGG CGCTAGCTGG TACGGTTGCG CCGAGTACTG CACCGTCGGC GGTTGCCCGT
GGCTTTGAAG TCCGTGTGGT ACCACTGAAG TACATCTCGG CGAGCGAGAT GAAAAAAGTG
CTTGATCCAT ACGCACGTCC TAATGCGATT GTCAGCATTG ATACAACGCG TAACCTGATT
ACCCTTGCGG GTACCCGTGT TGAGCTAGAG AACTATCTGC GCACTGTTCA AATTTTCGAT
GTTGATTGGT TGTCTGGTAT GTCGGTGGGT GTGTTCCCAA TTCAATCAGG CAAGGCGGAT
AAAGTTGCTG CCGATTTGGA AAAAGTGTTT GGCGAGAGCG GAAAAACGCC TAGCGCCGGT
ATGTTCCGTT TTATGCCTCT GGAGAGTGCT AACGCTGTTT TGGTGATTAC CCCACAGGCT
AGTTATCTGG ATCAGATTCA GAAATGGTTG GATAGTGTCG ACAGTGTTGG AGGTGCTTTG
AGTTTGTTCT CTTACGCGCT GAAGTACATC AAGGCCAATG ATTTAGCTAA TCGTCTGGCG
GAAGTATTTG GGGTCGGTGC TAGGCGTGAA GATAGTAATG TGTCGCTGGC TCCAGGCGCG
CAACTTGGCG TCTTGGGAAG TGGCGGCAGT GGCGATAACC TGCCAAGTGC TGGTGGTGGC
GGTAGCCTTT CTGCTGTTCC CAGTAACGGA GGGGCGGATA ACACGAGCAG TGCGAATGGT
GGTTTGGGGG GCAGTACGCT CCAGTTGTCA CCACGCACCC AAGGCAATGG CAGTGTGACT
CTTCATGTGC AGGGCGATAC CGTCGGTGTG TCGGCGGTGG AGGAAATTAA TACCTTGCTG
GTCCGTGCGA CTCCCCAAGC GTGGAAATCG ATACGTGATG TGATTGAGAA GCTTGATGTG
ATGCCGATGC AGGTACATAT CGAAGCTCAG GTCGCTGAAG TCAGCCTCAC CAACCAGCTC
AGCTATGGTG TGAATTGGTT TTTCCAGAAT TCTGTAAATG CTGCTGCTGA TGCGGCGGAT
AATGGCGCTT CCAACGGGAC TGGCATTGGC CTAGGTGCGG GCCTGCCTAG TGCCGCTGCG
CGTTCGGGGT GGAAGAGCAT TGCCGGTAAG GTCACCAGCA ATGGGTTGGC TTGGACGTTC
CTTGGAAAGA ACGCCGCAGC GATTATCAAT GCATTGGACC AAGTCACCCA GGTCCGTTTG
CTACAGACGC CGTCAGTATT CGTGCGTAAC AACGCCGAGG CCACGCTCAA CGTGGGTGCG
CGTATTCCAA TCAATTCCAC CTCAATTAAC ACCGGTCTGG GCAGTAACAG TACCTACTCC
TCAGTGCAGT ACATTGATAC TGGCGTCATT TTGAAAGTGC GTCCGCGCGT GACTAAGGAC
GGAATGGTGT TTTTGGACAT CGTACAGGAG GTCAGCACCC CTGGTTCACT GCCAGCGGCA
TGTAGCTCTG CTAGTTCGAC GTTGGTTAAC AGTGCCGCGT GCAATGTCCA GATCAACACA
CGCAGGATTA AGACGGAGGC CGCGGTGCAG AGTGGCGATA CGATCATGCT TGCTGGCCTG
ATTGACAGTA ATAGCGGTAA AGGCAGTAAC GGGGTCCCGT TCCTGAGTAA GGTGCCGATA
GTCGGTGGGT TGTTTGGTAC GAAGGCGCAG AATAATAATC GCCGGGAAAT CATTGTGTTA
CTGACCCCAG AGATTGTGCG TAACCCTCAG GAGGCGCGCA ATCTTACTGA TGAATACAGT
CAAAAATTCA ACGCAATGGA GCCATTACCA GGATTGAATA CAAAATGA
 
Protein sequence
MISRLLTVSI VTALLGSCVT PPSPMIKRNT LLHKHPATAD IPTTQLPDAV GTATVPLPDT 
TETPNALLSD AGGPLPVIRR GNGEVINQTV AATPPPSMGV AGKGSAIFNF EGESLQAVVK
AILGDMLGQN YFIASGVQGT VTLSTPKPVS SAQALSLLEM VLGWNNARMI YNNGRYSIVQ
ADQALAGTVA PSTAPSAVAR GFEVRVVPLK YISASEMKKV LDPYARPNAI VSIDTTRNLI
TLAGTRVELE NYLRTVQIFD VDWLSGMSVG VFPIQSGKAD KVAADLEKVF GESGKTPSAG
MFRFMPLESA NAVLVITPQA SYLDQIQKWL DSVDSVGGAL SLFSYALKYI KANDLANRLA
EVFGVGARRE DSNVSLAPGA QLGVLGSGGS GDNLPSAGGG GSLSAVPSNG GADNTSSANG
GLGGSTLQLS PRTQGNGSVT LHVQGDTVGV SAVEEINTLL VRATPQAWKS IRDVIEKLDV
MPMQVHIEAQ VAEVSLTNQL SYGVNWFFQN SVNAAADAAD NGASNGTGIG LGAGLPSAAA
RSGWKSIAGK VTSNGLAWTF LGKNAAAIIN ALDQVTQVRL LQTPSVFVRN NAEATLNVGA
RIPINSTSIN TGLGSNSTYS SVQYIDTGVI LKVRPRVTKD GMVFLDIVQE VSTPGSLPAA
CSSASSTLVN SAACNVQINT RRIKTEAAVQ SGDTIMLAGL IDSNSGKGSN GVPFLSKVPI
VGGLFGTKAQ NNNRREIIVL LTPEIVRNPQ EARNLTDEYS QKFNAMEPLP GLNTK