| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0779 |
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| Symbol | |
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| ID | 6203263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 917750 |
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| End bp | 920077 |
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| Gene Length | 2328 bp |
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| Protein Length | 775 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641702311 |
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| Product | general secretion pathway protein D |
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| Protein accession | YP_001829492 |
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| Protein GI | 182681332 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00261901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTCGC GTCTTTTAAC TGTTTCGATA GTCACTGCCC TTTTGGGTTC TTGTGTTACC
CCACCATCGC CGATGATTAA GCGGAATACT CTTCTGCATA AACATCCTGC TACTGCAGAC
ATACCGACGA CACAGCTCCC TGACGCTGTG GGGACGGCCA CTGTGCCGCT GCCTGACACT
ACGGAGACGC CGAATGCGCT GCTTTCTGAT GCTGGTGGCC CGCTCCCGGT GATTCGTCGT
GGTAATGGGG AAGTGATTAA TCAGACTGTT GCTGCAACTC CACCGCCATC AATGGGTGTG
GCTGGAAAAG GTAGCGCTAT CTTTAACTTC GAAGGAGAGT CGTTGCAGGC TGTGGTCAAA
GCCATTCTTG GCGACATGCT AGGGCAAAAC TATTTCATTG CATCGGGTGT GCAGGGCACG
GTGACTCTTT CCACACCTAA GCCTGTCTCG TCGGCACAGG CGCTGAGTCT CTTGGAGATG
GTATTGGGTT GGAACAACGC ACGGATGATT TATAACAATG GACGTTACAG CATTGTCCAG
GCCGACCAGG CGCTAGCTGG TACGGTTGCG CCGAGTACTG CACCGTCGGC GGTTGCCCGT
GGCTTTGAAG TCCGTGTGGT ACCACTGAAG TACATCTCGG CGAGCGAGAT GAAAAAAGTG
CTTGATCCAT ACGCACGTCC TAATGCGATT GTCAGCATTG ATACAACGCG TAACCTGATT
ACCCTTGCGG GTACCCGTGT TGAGCTAGAG AACTATCTGC GCACTGTTCA AATTTTCGAT
GTTGATTGGT TGTCTGGTAT GTCGGTGGGT GTGTTCCCAA TTCAATCAGG CAAGGCGGAT
AAAGTTGCTG CCGATTTGGA AAAAGTGTTT GGCGAGAGCG GAAAAACGCC TAGCGCCGGT
ATGTTCCGTT TTATGCCTCT GGAGAGTGCT AACGCTGTTT TGGTGATTAC CCCACAGGCT
AGTTATCTGG ATCAGATTCA GAAATGGTTG GATAGTGTCG ACAGTGTTGG AGGTGCTTTG
AGTTTGTTCT CTTACGCGCT GAAGTACATC AAGGCCAATG ATTTAGCTAA TCGTCTGGCG
GAAGTATTTG GGGTCGGTGC TAGGCGTGAA GATAGTAATG TGTCGCTGGC TCCAGGCGCG
CAACTTGGCG TCTTGGGAAG TGGCGGCAGT GGCGATAACC TGCCAAGTGC TGGTGGTGGC
GGTAGCCTTT CTGCTGTTCC CAGTAACGGA GGGGCGGATA ACACGAGCAG TGCGAATGGT
GGTTTGGGGG GCAGTACGCT CCAGTTGTCA CCACGCACCC AAGGCAATGG CAGTGTGACT
CTTCATGTGC AGGGCGATAC CGTCGGTGTG TCGGCGGTGG AGGAAATTAA TACCTTGCTG
GTCCGTGCGA CTCCCCAAGC GTGGAAATCG ATACGTGATG TGATTGAGAA GCTTGATGTG
ATGCCGATGC AGGTACATAT CGAAGCTCAG GTCGCTGAAG TCAGCCTCAC CAACCAGCTC
AGCTATGGTG TGAATTGGTT TTTCCAGAAT TCTGTAAATG CTGCTGCTGA TGCGGCGGAT
AATGGCGCTT CCAACGGGAC TGGCATTGGC CTAGGTGCGG GCCTGCCTAG TGCCGCTGCG
CGTTCGGGGT GGAAGAGCAT TGCCGGTAAG GTCACCAGCA ATGGGTTGGC TTGGACGTTC
CTTGGAAAGA ACGCCGCAGC GATTATCAAT GCATTGGACC AAGTCACCCA GGTCCGTTTG
CTACAGACGC CGTCAGTATT CGTGCGTAAC AACGCCGAGG CCACGCTCAA CGTGGGTGCG
CGTATTCCAA TCAATTCCAC CTCAATTAAC ACCGGTCTGG GCAGTAACAG TACCTACTCC
TCAGTGCAGT ACATTGATAC TGGCGTCATT TTGAAAGTGC GTCCGCGCGT GACTAAGGAC
GGAATGGTGT TTTTGGACAT CGTACAGGAG GTCAGCACCC CTGGTTCACT GCCAGCGGCA
TGTAGCTCTG CTAGTTCGAC GTTGGTTAAC AGTGCCGCGT GCAATGTCCA GATCAACACA
CGCAGGATTA AGACGGAGGC CGCGGTGCAG AGTGGCGATA CGATCATGCT TGCTGGCCTG
ATTGACAGTA ATAGCGGTAA AGGCAGTAAC GGGGTCCCGT TCCTGAGTAA GGTGCCGATA
GTCGGTGGGT TGTTTGGTAC GAAGGCGCAG AATAATAATC GCCGGGAAAT CATTGTGTTA
CTGACCCCAG AGATTGTGCG TAACCCTCAG GAGGCGCGCA ATCTTACTGA TGAATACAGT
CAAAAATTCA ACGCAATGGA GCCATTACCA GGATTGAATA CAAAATGA
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| Protein sequence | MISRLLTVSI VTALLGSCVT PPSPMIKRNT LLHKHPATAD IPTTQLPDAV GTATVPLPDT
TETPNALLSD AGGPLPVIRR GNGEVINQTV AATPPPSMGV AGKGSAIFNF EGESLQAVVK
AILGDMLGQN YFIASGVQGT VTLSTPKPVS SAQALSLLEM VLGWNNARMI YNNGRYSIVQ
ADQALAGTVA PSTAPSAVAR GFEVRVVPLK YISASEMKKV LDPYARPNAI VSIDTTRNLI
TLAGTRVELE NYLRTVQIFD VDWLSGMSVG VFPIQSGKAD KVAADLEKVF GESGKTPSAG
MFRFMPLESA NAVLVITPQA SYLDQIQKWL DSVDSVGGAL SLFSYALKYI KANDLANRLA
EVFGVGARRE DSNVSLAPGA QLGVLGSGGS GDNLPSAGGG GSLSAVPSNG GADNTSSANG
GLGGSTLQLS PRTQGNGSVT LHVQGDTVGV SAVEEINTLL VRATPQAWKS IRDVIEKLDV
MPMQVHIEAQ VAEVSLTNQL SYGVNWFFQN SVNAAADAAD NGASNGTGIG LGAGLPSAAA
RSGWKSIAGK VTSNGLAWTF LGKNAAAIIN ALDQVTQVRL LQTPSVFVRN NAEATLNVGA
RIPINSTSIN TGLGSNSTYS SVQYIDTGVI LKVRPRVTKD GMVFLDIVQE VSTPGSLPAA
CSSASSTLVN SAACNVQINT RRIKTEAAVQ SGDTIMLAGL IDSNSGKGSN GVPFLSKVPI
VGGLFGTKAQ NNNRREIIVL LTPEIVRNPQ EARNLTDEYS QKFNAMEPLP GLNTK
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