| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0768 |
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| Symbol | |
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| ID | 6203720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 905941 |
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| End bp | 908934 |
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| Gene Length | 2994 bp |
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| Protein Length | 997 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641702300 |
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| Product | YadA domain-containing protein |
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| Protein accession | YP_001829481 |
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| Protein GI | 182681321 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport
[W] Extracellular structures |
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| COG ID | [COG5295] Autotransporter adhesin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAA ATCAAATTTA CCGCAAATTC TGGAATCTCT CTTTGGGTTC GTGGAGTGTG
GCCTCGCATA TGACTAATGA TGGAGGTTGC AGTGATGTTG TTTTACGTCA TTCAGGCGTA
CGAAACCGTA GCTTGGTGCT GGCAATCGGT CTTGCGCTTA CAAGTGTTAC TCATGCCCAA
TCGGTGAAAG GTCCTGCGAT GGTCACCGCG AGTAAGGTCA TGGTGGCTCA TGTGGATAGT
CAGGTAAATC GCACCGCTGA TCGTATTCCT ACAGGCGATG GGTCGGAGTT GATGACACAT
ATGGCGCTAG ATTGGAAATT CTTCCCATTT GGCAATAATA GTATTGCAAT CGGTTACTTA
TCTAAGGCTT TTGCGCCGAA TGCGATAGCG CTGGGTTACA ACAGCTCTGT GACTCAGAGT
GCCAACAACG GTGTCGCTCT TGGGAGCAAT AGCACCGTAT CAGGGGTCAA TTCGGTTGCT
TTGGGTGCTG GTTCGATAGC TTCAGAGCCT AATGTGGTTT CTGTGGGTGG TGGTGATGGG
GTGACTGGTT CTGCGGTGCG GCGCATTGTG AATGTGGGTG ATGGTATTGG TAATAACGAT
GCGGTGAATA AGTCGCAGTT GGATGGTGTG ACGGCATCGG TGAATGATGT GGCGGCATCG
GTGAAGACGA TTGCCTTAAC GAATCAAGTC ACCGGTAGCA GTGTTGCTAG TGCTAGTGGT
AAGGAAAGTA CTGCGATAGG TTCTGGTGCG CAGGCGGTGG CTGATAACAC TGCTGCTTTT
GGAGGACGTG CTATCGCTAA CGCTGTTGGT GCCAGTGCGT TAGGTTTTGA TAGCCATGCT
AAGGGAATCA ACAGTACAAC TGTGGGGACA CAAAGCGTCT CTCTGGGTCA AGGCGGTGTG
TCGCTCGGTT ACAACAGTTT TGTTGGCGAG GGTTCATTCA ACGGTTTGGC GCTTGGGAGT
AATAGCCTTG TGTTGTTACA AGGCGTCGAC TCGGTTGCTC TGGGTTCTGG TTCGATGGCT
TCAGAGCCTA ATGTGGTTTC TGTGGGTAGT GGTGATGGCT TGCGTGGTCC AGCGGTGCGG
CGCATTGTGA ATGTGGATGA TGGTATTGGT AATAACGATG CGGTGAATAA GTCGCAGTTG
GATGGTGTGA CGGCATCGGT GAATGATGTG GCGGCATCGG TGAAAAATAT TGCTGGGGCG
ATTCAAGTCA CTGGTAGCGG TGTTGCAAGT GTCAGTGGTC AGGATAGTAC TGCGGCCGGT
GCCAGTGCGC AGGCTGCCGG TGATAGCAGT GTTGCTTTGG GAGCGCGTTC CCGTGCTAAC
GCTATTGGTT CCAGTGCCTT GGGTGTGGAT GGTCATGCTT TTGGCGCCAA CAGCACTGCG
TTGGGAGGTC AAAGTACTGC CATCAGTGAG GGTGGTACGT CGTTGGGTTA CAACAGTTTT
GTTGCCCAGA GTGCGACCAA CGGTATCGCT CTTGGGAGCA ATGCCATCGT ATCAGGGGTC
AATTCAGTGG CTTTGGGTGC TGGTTCGATG GCTTCAGAGC TTAATGTGGT TTCTGTGGGT
GGTGGTGATG GGGTGACTGG TCCAGCAGTG CGGCGCATTG TGAATGTGGG TGATGGTATT
GGTAATAACG ATGCGGTGAA TAAGTCGCAG TTGGATGGTG TGACGGCATC GGTGAAAAAT
ATTGCTGGGG CGATTCAAGT CACTGGTAGC GGTGTTGCAA GTGTCAGTCG TAAGGACAGT
ACTGCGGCCG GTGCCAGTGC GCAGGCTGCC GGTGATAGCA GTGTTGCTTT GGGAACGCGT
GCCACTGCTA ACGCTATTGG TTCCATTGTG TTGGGTGTGG ACAGTCGTGC CAGAGGGGTC
AACAGTACGG CACTTGGGCG TCAGAGCAAT GCGATCGGTG ATGGCAGTGT GTCTCTGGGG
TTCAATAGTT TTGTTCGTCA GAGTGGTGAG CATGGTGTTG CGTTGGGTGC TGATGCCGGT
GTTTCTGGAA AAAATTCCAT CGCGCTGGGT TATGGTTCGC GTACTTATGA AGCTGATGTG
TTGTCAATTG GTAGTGGTAA CGGCCGCGGT GCTCCGGCGA CACGCCGTAT TGTTAATGTC
AGTTCCGGCA ATCTATCGCA GGTGAGCACT GATGCGGTGA ATGGTGGGCA GCTCTTCCAG
ACCCTAAGTA GCATGGCCAG TATTTTAGGT GGTGGTGCGG CGGTAGGGGC ACAAGGCGTG
TTGGTTGCGC CGGTGTATCA AATACAGGGC AGTAGTTACG GCAGTGTGGG TGCAGCGCTC
AAGGCGCTGG ATGGTAAGGT CACTGATATT GATCATCGCG TTAACGTGAA TAGCAATCTT
GCGGCGGGGG CTGCTGCGTC TACTCTCAGT GCTTCCAAGC CGGGGGCAAC GTCCAGTACG
GAGGTTGTGG GAGTTGCCAA GCTTGTTTCC GGTGCGGCGT TGTCTGATTC GAGTGTTGCT
GCCAATGCGC AGGTGTTGTC CAAAGAAAAT GGTGTCAGCA TTTCGGCGAC GGGGAGTAGC
GCTCAGAGTA GGGATGAGGT GCAGACGAGT TCGGTGGGTA CGGATTCGTT AGGTAGCTCG
CTCAATGCAC GGCAGGCGAC GATGGCCGTA GGCGCCTTGG TAACCCAGGG AGTGAGTAAA
ACGCAATTGG ATAACAGTAT GGCGGCGGCC AATAGCTACA CAGATGCACG GTTCTCGGCG
TTGAACGATA GTTTCGAGAG TTTGCGTAGT GATGTGAATG GACAGATGCG TCGGCAGGAT
CGCCGGATCA GTCGCCAAGG AGCGATGGGT GCGGCCATGT TGAACATGGC GACCAGCGCT
GCTGGAATCC ATACCCAAAA TAGGGTTGGT GCTGGTGTTG GCTTCCAGAA TGGTCAGGCA
GCACTTTCTC TGGGTTATCA GCGTGCGATC AGTGATAGGA GCACGGTCAC TATCGGTGGT
GCGTTCAGTA GTAGTGATAG TTCGGTAGGC ATTGGCGCGG GTTTTGGCTG GTAA
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| Protein sequence | MKENQIYRKF WNLSLGSWSV ASHMTNDGGC SDVVLRHSGV RNRSLVLAIG LALTSVTHAQ
SVKGPAMVTA SKVMVAHVDS QVNRTADRIP TGDGSELMTH MALDWKFFPF GNNSIAIGYL
SKAFAPNAIA LGYNSSVTQS ANNGVALGSN STVSGVNSVA LGAGSIASEP NVVSVGGGDG
VTGSAVRRIV NVGDGIGNND AVNKSQLDGV TASVNDVAAS VKTIALTNQV TGSSVASASG
KESTAIGSGA QAVADNTAAF GGRAIANAVG ASALGFDSHA KGINSTTVGT QSVSLGQGGV
SLGYNSFVGE GSFNGLALGS NSLVLLQGVD SVALGSGSMA SEPNVVSVGS GDGLRGPAVR
RIVNVDDGIG NNDAVNKSQL DGVTASVNDV AASVKNIAGA IQVTGSGVAS VSGQDSTAAG
ASAQAAGDSS VALGARSRAN AIGSSALGVD GHAFGANSTA LGGQSTAISE GGTSLGYNSF
VAQSATNGIA LGSNAIVSGV NSVALGAGSM ASELNVVSVG GGDGVTGPAV RRIVNVGDGI
GNNDAVNKSQ LDGVTASVKN IAGAIQVTGS GVASVSRKDS TAAGASAQAA GDSSVALGTR
ATANAIGSIV LGVDSRARGV NSTALGRQSN AIGDGSVSLG FNSFVRQSGE HGVALGADAG
VSGKNSIALG YGSRTYEADV LSIGSGNGRG APATRRIVNV SSGNLSQVST DAVNGGQLFQ
TLSSMASILG GGAAVGAQGV LVAPVYQIQG SSYGSVGAAL KALDGKVTDI DHRVNVNSNL
AAGAAASTLS ASKPGATSST EVVGVAKLVS GAALSDSSVA ANAQVLSKEN GVSISATGSS
AQSRDEVQTS SVGTDSLGSS LNARQATMAV GALVTQGVSK TQLDNSMAAA NSYTDARFSA
LNDSFESLRS DVNGQMRRQD RRISRQGAMG AAMLNMATSA AGIHTQNRVG AGVGFQNGQA
ALSLGYQRAI SDRSTVTIGG AFSSSDSSVG IGAGFGW
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