| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0738 |
|---|
| Symbol | hslU |
|---|
| ID | 6202096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 867968 |
|---|
| End bp | 869347 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641702272 |
|---|
| Product | ATP-dependent protease ATP-binding subunit HslU |
|---|
| Protein accession | YP_001829453 |
|---|
| Protein GI | 182681293 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTCTA AGACTGATTT CACTTCCTCA ACCATGACGC CACGCGAGAT TGTGCAGGAG
CTTGATCGCC ATATTGTTGG TCAGCAGGCC GCGAAGCGGT CTGTGGCAAT TGCGTTGCGT
AATCGTTGGC GCCGTATGCA GTTGCCTGAG GAGTTGCGTA ATGAGGTGAT GCCTAAGAAC
ATTTTGATGA TCGGTCCGAC GGGCGTAGGT AAGACGGAGA TTGCACGCCG TTTGGCAACT
TTGGCTAATG CACCGTTTGT CAAAGTCGAG GCGACGCGTT TCACTGAGGT GGGCTACGTT
GGCAAGGATG TGGAACAAAT CGGGCGTGAT TTGGTTGATA CCGCAGTCAA AATGTATCGT
GAGCAAGCTA AGGTGCGTGT ACGCACTCAG GCTGAGGAGT ACGCTGAGGA GCGCATTCTT
GACGCGTTAT TGCCGCGTCG TAGCGTTGGT ATCGGTTTTG ATGCTGATGC CGATGCTATA
CGTCAAGAAC CCTCTGCGCA TGAGAGTGAG ACTAGGGCGA AGTTCCGTCG TATGTTGCGC
AGCGGTGAGT TAGAAGAGCG CGAGATTGAG TTGGACGTTG CTGTCAACGT GAGTATGGAC
ATTATGACTC CTCCTGGTAT GGAGGAAATG GGTCAGCAGT TGCGTCAGAT GTTCTCCAAT
ATTGGGGGAG GCAAGTCTCA GAAGCGTAAG CTGGCGATCA AGGCGGCACG CCCGTTATTA
ATCGAAGAAG AGGCGGCTAA GCTGGTCAAC GAAGACGAAA TCCGTGCTGC AGCGATCGAA
GCTTGCGAAC AGAATGGGAT CGTCTTTATT GATGAGATCG ATAAGGTCGT TAAACGTGGT
GATACTGTTG GCGGCGGTGA TGTGAGTCGC GAAGGTGTGC AGCGCGATTT GCTGCCATTG
GTAGAGGGGT CGAATGTGTC TACCAAGTAC GGCACGATCA GGACCAACCA CATTTTGTTC
ATTGCTTCCG GTGCCTTTCA CCTCACCAAG CCAAGCGATT TAATTCCGGA GTTGCAAGGC
CGTTTCCCGA TTCGGGTGGA GTTGGATGCG CTGAGTAAAG CGGATTTTAT CCGTATCCTG
ACAGAGCCGA AGGCGGCGCT CACTAAGCAG TATCAGGAAT TGTTGAAAAC GGAAGGTGTG
TCGCTTGATT TTACAGAGGA TGCGATTGAC CGTATTGCCG AGATTGCTTA TTTGGTCAAC
GAGCGTCAGG AGAATATCGG TGCGCGGCGT TTGCACACGG TGTTGGAGCG ATTGTTGGAA
ACGCTGAGTT ATGAGTCTCC GGATCGTGAT GGCGAGTCCG TGACGGTCGA TGCCGATTAT
GTCAATGCGC ATTTGGGGGA ATTAGTGAAG GATCCAGATC TGAGTCGTTA CATTTTGTAA
|
|---|
| Protein sequence | MPSKTDFTSS TMTPREIVQE LDRHIVGQQA AKRSVAIALR NRWRRMQLPE ELRNEVMPKN
ILMIGPTGVG KTEIARRLAT LANAPFVKVE ATRFTEVGYV GKDVEQIGRD LVDTAVKMYR
EQAKVRVRTQ AEEYAEERIL DALLPRRSVG IGFDADADAI RQEPSAHESE TRAKFRRMLR
SGELEEREIE LDVAVNVSMD IMTPPGMEEM GQQLRQMFSN IGGGKSQKRK LAIKAARPLL
IEEEAAKLVN EDEIRAAAIE ACEQNGIVFI DEIDKVVKRG DTVGGGDVSR EGVQRDLLPL
VEGSNVSTKY GTIRTNHILF IASGAFHLTK PSDLIPELQG RFPIRVELDA LSKADFIRIL
TEPKAALTKQ YQELLKTEGV SLDFTEDAID RIAEIAYLVN ERQENIGARR LHTVLERLLE
TLSYESPDRD GESVTVDADY VNAHLGELVK DPDLSRYIL
|
|---|
| |