Gene XfasM23_0716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_0716 
Symbol 
ID6202481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp844464 
End bp845753 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content51% 
IMG OID641702250 
Productglucose/galactose transporter 
Protein accessionYP_001829431 
Protein GI182681271 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID[TIGR01272] glucose/galactose transporter 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCCAG CCCGGTTTCC GAGTTCTACT GTTTCCATTG CTATTGTCGG TGTGTTGTTC 
TTCATTATCG GTTTTCTGAC CTGGGTCAAT GGACCGCTGA TTACCTTTGT GCATCTTGTC
TTTGATCTGA ATGAGGTCGA TGCCTTCTTG GTGCTGATGG TGTTCTACCT GTCTTATTTC
TTTCTCGCCT TGCCCTCGGC ATGGATTCTC AAGTGCATTG GGTTGAAAAA AGGCTTGGCG
TTGAGTTTGC TGTTGATGGC CGTAGGCGCA GTCGTCTTCG GTGAATTTTC GACACAACGG
TATTACGCAG GCGCATTGGC CGGCTTGTTT GTGATTGGCA GTGGTTTAGC CTTGCAGCAA
ACTGCGGTCA ATCCTTATAT CAGCATCCTG GGGCCAATAG AGAGCGCGGC GCGACGTATT
GCGGTGATGG GGATTTGTAA CAAGGTCGCC GGTATTGTGG CGCCGTTGGT CATTGGTTCC
CTGGTGCTGC ATGGTGTTGG CGATTTGTCG ATGCAAGTTG CAACTGCCGA CCCGGCGACG
AAGGAACAAC TGCTTGCCGC CTTTGCCGCA AAGATTCATA CACCATATCT CATCATGGCC
GGTTTGTTGG CAGTGCTTGC GGTGGGCGTG TTGTTTTCTC CGCTGCCGGA GTTGCAGCCT
GCTGACGTCA ATCGTGTTTC ATCCGGCGAT ACCACGCAAA AGACCAACAT CTTTCAGTTC
ACGCACTTGT GGCTTGGGGT GTTGTGCATG TTCGTTTATG TGGGTGTGGA GGTGATGGCT
GGCGACGCAA TAGGCACCTA TGGTCATGCA CTCGGCTTGC CTTTGGACCA GACAAAACTG
TTCACCTCAG CAACATTAGG AGCGATGTTG CTTGGTTACA TGACCGGTTT GGCGGTGATT
CCAAACTTGA TTTCTCAAGA ACGTTATTTG AGTTTATCGG CGGTGTTGGG CGTCCTGTTT
TCTATCGGTG CGGCACTGAC GCATGGGTAT GTATCGGTGG CTTTTGTTGC TGCATTGGGC
TTTGCCAATG CGATGATGTG GCCAGCCATT TTCCCATTGG CAATCAATGC GTTGGGTCGT
TTTACCGAGA CAGGTTCAGC CTTGTTGATT ATGGGGATCG CTGGTGGCGC GATCATCCCG
CAGCTTTTCG CCTCTCTGAA ACAGTACCTT GACTTCCAAC TGGTGTTCGC TGGGTTGATG
GTGCCTTGTT ATCTGTACAT TTTGTTTTAT TCCTTGATTG CTGGAGCGAT CAAGGGTCGC
AGTGTGCAAC GTTTAGCCCT CGGGAAATGA
 
Protein sequence
MIPARFPSST VSIAIVGVLF FIIGFLTWVN GPLITFVHLV FDLNEVDAFL VLMVFYLSYF 
FLALPSAWIL KCIGLKKGLA LSLLLMAVGA VVFGEFSTQR YYAGALAGLF VIGSGLALQQ
TAVNPYISIL GPIESAARRI AVMGICNKVA GIVAPLVIGS LVLHGVGDLS MQVATADPAT
KEQLLAAFAA KIHTPYLIMA GLLAVLAVGV LFSPLPELQP ADVNRVSSGD TTQKTNIFQF
THLWLGVLCM FVYVGVEVMA GDAIGTYGHA LGLPLDQTKL FTSATLGAML LGYMTGLAVI
PNLISQERYL SLSAVLGVLF SIGAALTHGY VSVAFVAALG FANAMMWPAI FPLAINALGR
FTETGSALLI MGIAGGAIIP QLFASLKQYL DFQLVFAGLM VPCYLYILFY SLIAGAIKGR
SVQRLALGK