Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0716 |
Symbol | |
ID | 6202481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 844464 |
End bp | 845753 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641702250 |
Product | glucose/galactose transporter |
Protein accession | YP_001829431 |
Protein GI | 182681271 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTCCAG CCCGGTTTCC GAGTTCTACT GTTTCCATTG CTATTGTCGG TGTGTTGTTC TTCATTATCG GTTTTCTGAC CTGGGTCAAT GGACCGCTGA TTACCTTTGT GCATCTTGTC TTTGATCTGA ATGAGGTCGA TGCCTTCTTG GTGCTGATGG TGTTCTACCT GTCTTATTTC TTTCTCGCCT TGCCCTCGGC ATGGATTCTC AAGTGCATTG GGTTGAAAAA AGGCTTGGCG TTGAGTTTGC TGTTGATGGC CGTAGGCGCA GTCGTCTTCG GTGAATTTTC GACACAACGG TATTACGCAG GCGCATTGGC CGGCTTGTTT GTGATTGGCA GTGGTTTAGC CTTGCAGCAA ACTGCGGTCA ATCCTTATAT CAGCATCCTG GGGCCAATAG AGAGCGCGGC GCGACGTATT GCGGTGATGG GGATTTGTAA CAAGGTCGCC GGTATTGTGG CGCCGTTGGT CATTGGTTCC CTGGTGCTGC ATGGTGTTGG CGATTTGTCG ATGCAAGTTG CAACTGCCGA CCCGGCGACG AAGGAACAAC TGCTTGCCGC CTTTGCCGCA AAGATTCATA CACCATATCT CATCATGGCC GGTTTGTTGG CAGTGCTTGC GGTGGGCGTG TTGTTTTCTC CGCTGCCGGA GTTGCAGCCT GCTGACGTCA ATCGTGTTTC ATCCGGCGAT ACCACGCAAA AGACCAACAT CTTTCAGTTC ACGCACTTGT GGCTTGGGGT GTTGTGCATG TTCGTTTATG TGGGTGTGGA GGTGATGGCT GGCGACGCAA TAGGCACCTA TGGTCATGCA CTCGGCTTGC CTTTGGACCA GACAAAACTG TTCACCTCAG CAACATTAGG AGCGATGTTG CTTGGTTACA TGACCGGTTT GGCGGTGATT CCAAACTTGA TTTCTCAAGA ACGTTATTTG AGTTTATCGG CGGTGTTGGG CGTCCTGTTT TCTATCGGTG CGGCACTGAC GCATGGGTAT GTATCGGTGG CTTTTGTTGC TGCATTGGGC TTTGCCAATG CGATGATGTG GCCAGCCATT TTCCCATTGG CAATCAATGC GTTGGGTCGT TTTACCGAGA CAGGTTCAGC CTTGTTGATT ATGGGGATCG CTGGTGGCGC GATCATCCCG CAGCTTTTCG CCTCTCTGAA ACAGTACCTT GACTTCCAAC TGGTGTTCGC TGGGTTGATG GTGCCTTGTT ATCTGTACAT TTTGTTTTAT TCCTTGATTG CTGGAGCGAT CAAGGGTCGC AGTGTGCAAC GTTTAGCCCT CGGGAAATGA
|
Protein sequence | MIPARFPSST VSIAIVGVLF FIIGFLTWVN GPLITFVHLV FDLNEVDAFL VLMVFYLSYF FLALPSAWIL KCIGLKKGLA LSLLLMAVGA VVFGEFSTQR YYAGALAGLF VIGSGLALQQ TAVNPYISIL GPIESAARRI AVMGICNKVA GIVAPLVIGS LVLHGVGDLS MQVATADPAT KEQLLAAFAA KIHTPYLIMA GLLAVLAVGV LFSPLPELQP ADVNRVSSGD TTQKTNIFQF THLWLGVLCM FVYVGVEVMA GDAIGTYGHA LGLPLDQTKL FTSATLGAML LGYMTGLAVI PNLISQERYL SLSAVLGVLF SIGAALTHGY VSVAFVAALG FANAMMWPAI FPLAINALGR FTETGSALLI MGIAGGAIIP QLFASLKQYL DFQLVFAGLM VPCYLYILFY SLIAGAIKGR SVQRLALGK
|
| |