Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0707 |
Symbol | |
ID | 6201980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 835588 |
End bp | 836949 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641702241 |
Product | recombination factor protein RarA |
Protein accession | YP_001829422 |
Protein GI | 182681262 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.56713 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACACGAC AGCGCTTTCC GACTCTTCAG CATGATTTGC TTGGTGTGGC TCCTCTCTTG CAGCCACTGG CCGAGCGCAT GCGTCCTCGT ACTCTTCATG AGATGGTAGG ACAGAAGCGC TTGCTTGACC CAGATCGTGC ATTGCATCGT GCGGTTGCTT CCGGGCATGT GCATTCCATG ATTTTGTGGG GACCGCCAGG GTGCGGCAAG ACGACATTGT CATTGCTGTT AGCGCATTAC ATTGATGCAG AATTTCGGTC AGTCTCGGCT GTTCTTTCGG GGTTGCCGGA GGTGCGTCAG ATCTTGGCTG ACGCTGCGCA GCGTTTTTCT GAAGGACGCC GCACCGTCTT GTTCGTGGAC GAAGTGCATC GTTTTAACAA GATGCAGCAG GATGCGTTTC TGCCGCATAT CGAGCGTGGT TCCATTATTT TCGTTGGTGC CACTACTGAG AATCCATCCT TCGAATTGAA CTCGGCGTTA CTGTCGCGTT GCCGTGTCCA CGTGTTGGAG GCAGTGTCGT CACAGGATAT TGTTGTGGCA TTGCAGCGGG CGTTGCAGGA TACGGAGCGG GGTTTGGGTG GGCAGAAGAT TGAAGTGTCT CAAGCCTCTC TGTTGGAGAT TGCCAAGGCT GCAGATGGTG ACGTGCGTCG TGCGCTCACC TTGTTGGAGA TTGCTGCTGA GCTTGCCCAG GATGAGCAGA TAACCGCTGA CTTGCTTTCG CAAGTGCTTG CCGATCGTAG TCGGCGCTTC GACAAACGGG GGGAGCAGTT CTATGACCAG ATTTCGGCCT TGCACAAGAG TGTACGTAGT TCCAACCCGG ATGCGGCATT GTATTGGTTG CTGCGTATGC TGGATGGTGG TTGTGATCCT ATCTACTTGG CCCGGCGCTT GACCCGCATA GCGATTGAGG ATATTGGTTT GGCTGATCCG CGTGCACAGT CGATGGCTCT GGAGGCTTGG GATATCTATG AGCGGTTGGG TAGCCCGGAG GGAGATCTGG CGTTCGCGCA GTTGGTGCTG TACTTGGCAA GTACAGCAAA ATCGAATGCT GGCTATGTTG CGTTCAATGT GGCCAAGGAG GACATTCGCC AGACGGGTAC TCAGGATGTT CCGCTACATC TGCGCAATGC ACCGACCAGA CTCATGAAAA GTCTCGGTTA CGGTATCGAG TATCAGTACG ATCATGATGC TGAGAACGGT GTTGCGCTGG AACAGACTTG TTTTCCCGAT GCGCTGGGGG AGCGTATTTA CTATCAACCG GTATCCCGCG GTCTGGAGAT TAAGCTGAAG GAGAAGTTGG ACTGGTTGCG TGCAGCACGT GCTCAGATTC AAGCGGATAA GCCGCAGCCG CCGCGTGCAT AG
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Protein sequence | MTRQRFPTLQ HDLLGVAPLL QPLAERMRPR TLHEMVGQKR LLDPDRALHR AVASGHVHSM ILWGPPGCGK TTLSLLLAHY IDAEFRSVSA VLSGLPEVRQ ILADAAQRFS EGRRTVLFVD EVHRFNKMQQ DAFLPHIERG SIIFVGATTE NPSFELNSAL LSRCRVHVLE AVSSQDIVVA LQRALQDTER GLGGQKIEVS QASLLEIAKA ADGDVRRALT LLEIAAELAQ DEQITADLLS QVLADRSRRF DKRGEQFYDQ ISALHKSVRS SNPDAALYWL LRMLDGGCDP IYLARRLTRI AIEDIGLADP RAQSMALEAW DIYERLGSPE GDLAFAQLVL YLASTAKSNA GYVAFNVAKE DIRQTGTQDV PLHLRNAPTR LMKSLGYGIE YQYDHDAENG VALEQTCFPD ALGERIYYQP VSRGLEIKLK EKLDWLRAAR AQIQADKPQP PRA
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