Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0657 |
Symbol | |
ID | 6202120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 781649 |
End bp | 782650 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641702192 |
Product | polyprenyl synthetase |
Protein accession | YP_001829373 |
Protein GI | 182681213 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCATTG CCACCACTCC TCTCCATACC GCCCTAAGCC TTCCCCAGAT TCAATCCTTC GCAGCATCAG ACATGGCTGC AATCGATACG CTGATCCACG ACCGACTGAC CTCAGACATC GTGCTGATCA ATCAAATTGC CGATCACATC ATCTGCTCAG GTGGCAAACG CCTGCGCCCC ATGCTAACGA TGTTAGCTGG CCACGCCATC GGCCCCACAG GCCCTCATCA CCACCAACTG GCTGCCATCA TTGAGTTCAT CCACACCGCC ACACTGCTAC ATGATGATGT GGTCGACGGA TCGGAACTGC GCCGCAGTCG CAGTACCGCA AATGCACTAT GGGGCAATGC ACCCAGCGTT CTAGTCGGTG ATTTTCTATA TTCGCGTAGC TTCCAACTGA TGACCGAATT AGCCAACCTA GAAGTCATGC AGATATTGGC TGAAACCACC AACCGTATCT CTGAAGGCGA AGTACTGCAA TTGTTGCACG TACACAACCC TGATACCGAC GAAACTACCT ACCTAAGCGT GATCGAGCGC AAAACGGCAA TATTGTTTGC TGCCGCAGCA CAACTCGGAG CACTCGCATC CCATGCCGAT ACGCAGACAC AGACACGGAT GTACGAATAT GGAATGCAAT TGGGCTATGC ATTCCAAATC ACCGACGACG TACTCGACTA CACCGCCAAC AATAGCCAAC TGGGCAAAAA TCTCGGTGAC GATCTCGCCG AAGGCAAAGC CACCTTACCA GTGATCCATG CGATGACACA CTCAGACGCA GCCACATGTG AACGTTTGCG CATGATCATC AGCAAAGGCG ATAGCGATGC AATGCCAGAA GTGCTGAACG CGATCCGTAC AACTGGCAGC TTGGACTACA GTCGGCAACG CGCCAGCGCG TATGCGGCGA CCGCCGAACG CGCACTAGAC GGCCTGCCCG AAACCGAAGC AGTTGCCGCG TTGCGCGGCT TGGCCCGCTA CGCTGTCCAA CGAACCTACT GA
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Protein sequence | MSIATTPLHT ALSLPQIQSF AASDMAAIDT LIHDRLTSDI VLINQIADHI ICSGGKRLRP MLTMLAGHAI GPTGPHHHQL AAIIEFIHTA TLLHDDVVDG SELRRSRSTA NALWGNAPSV LVGDFLYSRS FQLMTELANL EVMQILAETT NRISEGEVLQ LLHVHNPDTD ETTYLSVIER KTAILFAAAA QLGALASHAD TQTQTRMYEY GMQLGYAFQI TDDVLDYTAN NSQLGKNLGD DLAEGKATLP VIHAMTHSDA ATCERLRMII SKGDSDAMPE VLNAIRTTGS LDYSRQRASA YAATAERALD GLPETEAVAA LRGLARYAVQ RTY
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