| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0644 |
|---|
| Symbol | |
|---|
| ID | 6203311 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 760716 |
|---|
| End bp | 761933 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641702179 |
|---|
| Product | tryptophan synthase subunit beta |
|---|
| Protein accession | YP_001829360 |
|---|
| Protein GI | 182681200 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0133] Tryptophan synthase beta chain |
|---|
| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGATA TTACTGTTGC TAACTATCAT GCTTTCCCTG ATGCTCGCGG CCATTTTGGG
CGTTACGGTG GTCGTTTTGT TGCTGAAACG TTGATCGGAC CGTTGCAGGA GCTTGCACAG
GCCTATGATG CGGCGCGCCA TGATCCCGAT TTCATCGCCG CTTATAACAA GGATCTCAAG
GATTATGTGG GTCGCCCCAG TCCGATCTAC CATGCTGAAC GGCTGAGCCG TAAGGTGGGT
GGCGCTCAAA TTCTGTTGAA GCGTGAGGAT CTTAATCACA CCGGTGCGCA CAAAATCAAT
AACACCATTG GCCAGGCCTT GCTGGCAGCA CGTATGGGCA AGACACGCAT CATTGCCGAG
ACTGGAGCCG GTCAGCATGG TGTCGCCAGT GCTACTGTCG CTGCGCGTTT GGGTTTGGAG
TGTGTGGTGT ATATGGGGGC TACGGATATC CAGCGGCAGC AGATCAACGT GTATCGGATG
AAGTTGTTGG GTGCGACGGT GGTGCCCGTG ACTTCCGGTT CAGCCACACT CAAGGATGCG
CTTAACGAAG CGATGCGTGA TTGGGTGACG CATGTGGGGC ATACGTTTTA TATCATTGGC
ACTGTTGCTG GCCCAGATCC GTATCCGCGT ATGGTGCGCG ACTTCAACGC AATTGTTGGC
CGTGAGGCAC GTGCGCAGAT GATTGAAGAT TATGGGCGTT TACCGGATGC GATGACTGCT
TGTGTTGGCG GTGGGAGTAA TGCCATTGGT TTGTTCCATG CCTTCCTCAA TGATGCTTCG
GTCAGGATCT ATGGTGCTGA GGCGGCTGGA GACGGCATTG CGACGGGCCG TCACGCGGCC
TCAATTGTTG CCGGTCGTCC GGGAGTGTTG CATGGGAATC GCACCTACGT GGTGTGTGAT
GATGATGGAC AGATTTTGGA AACCCATTCT GTATCAGCCG GTTTGGATTA TCCGGGGGTT
GGTCCTGAGC ACGCTTTTTT GGCTGACAGT GGCCGGGTGC AGTATGTGGG GATTCGGGAT
GAAGAAGCGT TGGCTGCATT CCACTTGCTT GCACATACTG AAGGCATCTT GGCTGCATTG
GAATCCAGTC ACGCTGTGGC CCATACCATG ACGTTGGCGC GCGATCTTCC CAAAGATGCA
TTGGTACTGT GTAACTTGTC CGGTCGCGGT GATAAGGATG TGCACACGAT CGCGGCGCGC
GAAGGTGTAC GTGTCTGA
|
|---|
| Protein sequence | MSDITVANYH AFPDARGHFG RYGGRFVAET LIGPLQELAQ AYDAARHDPD FIAAYNKDLK
DYVGRPSPIY HAERLSRKVG GAQILLKRED LNHTGAHKIN NTIGQALLAA RMGKTRIIAE
TGAGQHGVAS ATVAARLGLE CVVYMGATDI QRQQINVYRM KLLGATVVPV TSGSATLKDA
LNEAMRDWVT HVGHTFYIIG TVAGPDPYPR MVRDFNAIVG REARAQMIED YGRLPDAMTA
CVGGGSNAIG LFHAFLNDAS VRIYGAEAAG DGIATGRHAA SIVAGRPGVL HGNRTYVVCD
DDGQILETHS VSAGLDYPGV GPEHAFLADS GRVQYVGIRD EEALAAFHLL AHTEGILAAL
ESSHAVAHTM TLARDLPKDA LVLCNLSGRG DKDVHTIAAR EGVRV
|
|---|
| |