Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0642 |
Symbol | truA |
ID | 6202440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 758782 |
End bp | 759555 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641702177 |
Product | tRNA pseudouridine synthase A |
Protein accession | YP_001829358 |
Protein GI | 182681198 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0101] Pseudouridylate synthase |
TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGCGTT ATGCGTTAGG CGTAGAGTAC GACGGCAGCG AGTTTCTGGG CTGGCAACAA TTGGGTGAGA TGGGTCCTAG CGTACAGGCG ACACTACAGC AGGCTTTGGC TTCGGTAGCG GATTCGTCGG TGCGGGTGGT GTGTGCCGGT CGTACGGATG CTGGGGTCCA TGGCCAGTGC CAGGTTGTGC ATTTTGATAG TGCGGTTACC CGTCCTCCAC GTGCCTGGAT ATTGGGCACG ACGACACGGT TACCATCCTC GGTGGCGGTA CGTTGGTGTG TGCCGACATC CGAGGATTTT CATGCTCGCT TCTCCGCGTG CGCACGCCGT TATCGTTATC GGTTGTTAAA CCGTCAGGTG AGACCTGCGT TGCAGCATCA ATTTTTGAGC TGGGAGCGGC ATCCGTTGGA TGCCCAGGCG ATGCATGTTG CTGCGCAGAT GTTGCTTGGA GAAAACGATT TCAGTGCGTT TCGCAGCGCG CAGTGTCAGG CGCTACATGC GCGCCGTGAG CTTCAAGCGA TTTCGGTACG GCGCGATGCC GAGGTCATCG AAATATGTGT CCAAGCCAAT GCCTTTCTTC ATCACATGGT GCGCAATATC GTGGGATCGT TGCTTATGGT GGGTACCGGT GAACGTCCGA TGGAATGGAT TGCAGAGCTG CTTGCGGGGC GTGACCGGAC CATGGCTGGA CCGACTGCCT CAGCGCGTGG GCTGGTCTTT GTCGGACCTT TGTATCCGGA AAAGTGGCAC TTGCCTATGG AAGTGAGTGT ATGA
|
Protein sequence | MMRYALGVEY DGSEFLGWQQ LGEMGPSVQA TLQQALASVA DSSVRVVCAG RTDAGVHGQC QVVHFDSAVT RPPRAWILGT TTRLPSSVAV RWCVPTSEDF HARFSACARR YRYRLLNRQV RPALQHQFLS WERHPLDAQA MHVAAQMLLG ENDFSAFRSA QCQALHARRE LQAISVRRDA EVIEICVQAN AFLHHMVRNI VGSLLMVGTG ERPMEWIAEL LAGRDRTMAG PTASARGLVF VGPLYPEKWH LPMEVSV
|
| |