Gene XfasM23_0641 details

Gene Information

• Locus tag: XfasM23_0641
• ID: 6203019
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M23
• Kingdom: Bacteria
• Replicon accession: NC_010577
• Strand: +
• Start bp: 756818
• End bp: 758740
• Gene Length: 1923 bp
• Protein Length: 640 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 641702176
• Product: hypothetical protein
• Protein accession: YP_001829357
• Protein GI: 182681197
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3170] Tfp pilus assembly protein FimV
• TIGRFAM ID: [TIGR03504] FimV C-terminal domain; [TIGR03505] FimV N-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGGTGGT TATTACCCTT TGCCGTTTGC GCGAGTAGCA ATACTGATCG TATTGTGGTC 
ATTCGATCCA GAATTCCGGC TGCACCGGTT ATATTGGTGT TCATGAAATC TATGGGCAAG 
GGCGCATTAA GCCCGGTATA TGGCTTGACT GCCTTGTTTT TAGTGCTGTG CAGCAATGCT 
GCGTTGGCGC TTGGGCTTGG TGATATTCGT GTGCTTTCCA AGCCAGGACA GCCTTTGGTA 
GCAGAGATCC CGGTGATCTC TAACGAGGCC GGCGAGCTTG ACGATGTGCG CGTTGCGCTG 
GCTTCGCCAG AGACCTTCGC CCGGGTTGGA TTAGAGCGCC CCAACGGTTT TCTGGACGAT 
TTGCAGTTTC AATTCTCCAA GGATCGTCAC GGTCGCGCGG TTGTTCGGGT GACTAGCAAC 
CAGTCTGTGC AGCAGAAGGC AATCAACTTT TTGATTGACG TGGAGTGGAA ACAAGGGCGG 
TTAGTACGTG AATACTCCGC TTTGATTGAT GCGCCTAATA CTGCCGCAGC AATTGCTGAG 
CCGGCGATCA ATGCGCCGCA GGTGGCTTCT GCCAATGTCA TTGTGCGTTC TGCGCCAGCT 
CCCAGCGTTC CTGTGCCCCC TCCCCCTCCT GCCGTTCACG TTACTGCGCC GACCCCATCC 
ATATCCAGTG TTGACGAGGC GACGGATACA GCCTCGGCCG ATGTGGGTGA TGCAACAGAA 
ACAGAAGGTG TAGGGACCGT GGCCACTCCT GCTGCGCCGC CATCCGATGC AGGGCCGGTC 
ACGGTGCAAC GCGGCCAAAC ACTATCGCAA CTTGCTTCTC AGTTAGCGCG CCAGAGTGGG 
CGTACCTTGG ACCAAACCAT GCTGGCGATG TTGCGTACTA ATCCGAGTGC CTTCATCGGT 
AGCAATATCA ACTTACTTAA ACAGGGTGCT GTGCTGCGCA CTCCCACGCA GGAGGCGCTG 
AGTGAGCTTG GGGCTGCCGA AGCTAAGGCA ATGGTGCGTG AACAGGCTGC GCAGTGGCGT 
CAAGCACGTG CAAGCATCCC GCAGCCAGCC GAATCAGGGG CTGCGTCACA GTCGCGTGCT 
GTTGCTGTTC CCGATACAGC GACGGATCGG CTTGAAATCG CGCCAGCCGT ACCCATAGAC 
ACCAAGAAGG CTGGCACTAT CAGTGGTACC AGCAATTCAA GAGAGGGCGA TATGCCTGGT 
GGGGAGCAAT TACAACAAGC ACGCGAAGAC ATTGCCAGCC GCGACGCTGA GATTCAAGAT 
TTGCGTTCCC GACTTATTGA TTTGGAACAA CTGCGCAAAA AACAGCAGCA ATTGATCGCG 
TTGAAGGACA GTGAGCTGGC AGCGGCTCAA CAGCATTTGC CAAAAACCCA GGGACATAGC 
AGGTTGGGCA ATGGGTCAAT GATCCTGTTA GGTGGTGCTG CTTTGCTGTT TATCTGCATG 
GTGTGGTGGT GGGTGAACCG CCGTCCCAAG CCTTCGCCGT TGCCTCATTT GCCATCTCGT 
GAATTCGACT CGGAGGCATT GGTTGTTGCT TTTCCTCACA CTGCTGCTGT GTCGCGGAGT 
GATTTTTTAG AGATGCCTGA TCAGGTGGTG CGTGAGGGCG AACGCATGCA CGTTCCTGAC 
CTTACTCTTG ATCGTGTCTC GGCAGGTATG TATACCTCCG TCAATCCATC TGTTAAGCCT 
CAGACATTTG TCCAGGTTCA AGCTGCTAAT GTTCAAGCTG CTAGTGTTGC TGCGCAGCAA 
AGTCAGCCCC AGGCACAGCA GCCTGGCCCC CCATCCGGGG TGCGTGATCG TCTGGAACTG 
GCGGTTGCCT ATCTTGATTT GGGGGATAAG GAGACCGCGC GTAGTCTTTT GCGTGAAGTG 
GTGGTCACCG GAGATGATGT TGCACGTGCC GAAGCAGCAG CATTACTTAA TCAAATTGCA 
TAA 

 

Protein sequence

MGWLLPFAVC ASSNTDRIVV IRSRIPAAPV ILVFMKSMGK GALSPVYGLT ALFLVLCSNA 
ALALGLGDIR VLSKPGQPLV AEIPVISNEA GELDDVRVAL ASPETFARVG LERPNGFLDD 
LQFQFSKDRH GRAVVRVTSN QSVQQKAINF LIDVEWKQGR LVREYSALID APNTAAAIAE 
PAINAPQVAS ANVIVRSAPA PSVPVPPPPP AVHVTAPTPS ISSVDEATDT ASADVGDATE 
TEGVGTVATP AAPPSDAGPV TVQRGQTLSQ LASQLARQSG RTLDQTMLAM LRTNPSAFIG 
SNINLLKQGA VLRTPTQEAL SELGAAEAKA MVREQAAQWR QARASIPQPA ESGAASQSRA 
VAVPDTATDR LEIAPAVPID TKKAGTISGT SNSREGDMPG GEQLQQARED IASRDAEIQD 
LRSRLIDLEQ LRKKQQQLIA LKDSELAAAQ QHLPKTQGHS RLGNGSMILL GGAALLFICM 
VWWWVNRRPK PSPLPHLPSR EFDSEALVVA FPHTAAVSRS DFLEMPDQVV REGERMHVPD 
LTLDRVSAGM YTSVNPSVKP QTFVQVQAAN VQAASVAAQQ SQPQAQQPGP PSGVRDRLEL 
AVAYLDLGDK ETARSLLREV VVTGDDVARA EAAALLNQIA