| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0633 |
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| Symbol | |
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| ID | 6202480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 748737 |
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| End bp | 750686 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641702168 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001829349 |
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| Protein GI | 182681189 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.716649 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTATGC TATTACGTTT AGTGACTGCA CTAACGCTGG GCATTGCAGC CTGTGCCCGT
GCACAAGGTG ACGACCCACA ACTGATGGCT GTTCGCGATG CCATCGCCGC AGCCGAAAAT
GGTCGCCTCG ACCCATCTCA AGCAGCAACT CTGAACAAAC ATCCGTTATA CGGCTGGATC
GAATACGCCA ATCTACGCCG CAATATCGAC ACAATCAGCA ATGCGCAGGC GCAAAGCTTC
CTATCACGTT ACGCCGACCA AGCCGTCGCT CAGGCATTCC GCTCAGCATG GCTGCCAATC
GTCGTGCGGC GTAAAGACTG GAACACACTG CTAACACATT GGAAGCCGAC CCGTACCGTC
AGTCTACGTT GTGCCCAACT GGAAGCACGC TATCGTTTAG GCAAAGCAGA CACCCAGTGG
ACCAAAGAAG CACAAGAACT ATGGCGCGAT GCCGACAAAC CAGTGCCTAG CATCTGTGAT
TCCGTATTCG CCACACTCTC TGCTCAAGGA GGCCTGGATA ATGCACTGCG CTGGGCACGC
ATCGAAGCTG CTGCCGATGC GCAACAACCC GAAGTCATGC GCGCCGCAGC ACGCGGCCTG
CCAGCCAGTG ATCAAACCCT GGCTAACAAC TACGCCGCAT TTGTCGAAGC GCCAAATCAA
GCCCAGGCCG TATCGAATTG GCCCAAGACG GAACGTAGCC AACGCATCGT TATTGACGGA
TTAGCACGCA TGGCCAAAGC TGATCCGAGC GCCGCTGAAC GTTCCTTACC CAAGTACACC
GATGCCCTTA ACTTCAATGA GGCGCAGCGT GGTCAAGTGC TGTACCAAAT CGCATTATGG
ACCGTCGCCT CCTACCAACC AGAATCAGCA CGGCGACTGG CAGCAGTACC AGAATCGGCC
TACGACGAAC GTTTGCACGA ATGGCGTACC CGCGAAGCAA TGGCACGTGG CGACTGGCAA
GCTGCATTAA ATGCGATCCG CGAAATGCCA CCGACACAGC GTGGCGAGCC CCGCTGGCAA
TACTTCGAAG CACGCTTGGC CGAAAAGACC GGCGACAGCG TACAGAGCCA AACGCTGTAC
CGTGCTGCTG CACGCAGTGC GACATTTCAT GGTTTCCTTG CAGCAGACCA TCTGCAACAA
CCCTATTCAC TCTGCCCGTG GCATCCCAAC GATACCCCTG ACCACGCCCA GGCCAAAGCC
GCTGTTGCAC GCACTCCAGC ACTGGTACGT GCGATAGCAC TGTTCCAGAT TGACCGGACA
GCTTGGGCCA CACTTGAATG GAACAACGCA CTCACACGCT TTAATGACAA CGAACGCCGA
CTCGCAGTAG AAGTGGCCAG TGACGCAGAA TGGTTCGACC GTGCCGTATT CGCACTTGGT
AAGCAGCCTG CCGAGCTACG CATGTACGAC CTGCGCTTCC CATTACGCCA TGAAACTACG
ATCCGCAGTG AAGCAACCAA AAACGGATTG GACCCAGCCT GGATCACTGC CGAAATCCGA
GCAGAAAGCG TCTTCAACCC ACGCGCCCGC TCCCCAGCAA ATGCACGTGG TCTGATGCAA
GTGCTACCCA GCACAGCAGC AAGCGTCGCC AAACGCATTG GTCTCACAGA CTATGTCAAC
GCCGATAGCC TATACGATGC AGACACAAAC ATCATTATTG GCAGTGCTTA CCTACGCCAA
CTCCTTGACC AATACAGCCA GACGTATCTG ACCATTGCAG CTTACAACGG AGGCCCAGGC
TCAGTGCAAC GCTGGTTATC ACAGCGCCCC AACTATGATC CGGATCTCTG GATCGAAACC
ATCAACTACA AAGAAACACG CGAATATGTC GCGCGTGTGC TTGCTTTTAG CGTGATCTAT
GACTGGCGCA TCAACGGCGA TACACTGCTC CTCACTGATC GTTTACTTGG CAAGTCCACT
CACCGACGTA AACAAATCAT CTGCCAGTGA
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| Protein sequence | MTMLLRLVTA LTLGIAACAR AQGDDPQLMA VRDAIAAAEN GRLDPSQAAT LNKHPLYGWI
EYANLRRNID TISNAQAQSF LSRYADQAVA QAFRSAWLPI VVRRKDWNTL LTHWKPTRTV
SLRCAQLEAR YRLGKADTQW TKEAQELWRD ADKPVPSICD SVFATLSAQG GLDNALRWAR
IEAAADAQQP EVMRAAARGL PASDQTLANN YAAFVEAPNQ AQAVSNWPKT ERSQRIVIDG
LARMAKADPS AAERSLPKYT DALNFNEAQR GQVLYQIALW TVASYQPESA RRLAAVPESA
YDERLHEWRT REAMARGDWQ AALNAIREMP PTQRGEPRWQ YFEARLAEKT GDSVQSQTLY
RAAARSATFH GFLAADHLQQ PYSLCPWHPN DTPDHAQAKA AVARTPALVR AIALFQIDRT
AWATLEWNNA LTRFNDNERR LAVEVASDAE WFDRAVFALG KQPAELRMYD LRFPLRHETT
IRSEATKNGL DPAWITAEIR AESVFNPRAR SPANARGLMQ VLPSTAASVA KRIGLTDYVN
ADSLYDADTN IIIGSAYLRQ LLDQYSQTYL TIAAYNGGPG SVQRWLSQRP NYDPDLWIET
INYKETREYV ARVLAFSVIY DWRINGDTLL LTDRLLGKST HRRKQIICQ
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