| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0624 |
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| Symbol | |
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| ID | 6202482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 736941 |
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| End bp | 739190 |
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| Gene Length | 2250 bp |
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| Protein Length | 749 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641702161 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_001829342 |
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| Protein GI | 182681182 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.166462 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATC TGACTCGTCC CTTCTTCCAT GGCTTCGAAC AGATGCCACT GCGCGAATAC
GCCGAACGTG CCTATCTTGA TTATTCGATG TATGTCGTAC TTGATCGCGC ACTCCCCTTT
ATCGGAGACG GTCTCAAGCC GGTACAGCGG CGCATCATCT ACGCCATGCA CGAATTGCGG
CTCAATCCAA AGGCAAAACC CAAGAAGTCT GTACGTGCGG TTGGCGACGT GATCGGTAAG
TACCACCCAC ACGGCGACTT GGCCTGTTAC GAAGCACTCG TACTGATGGC ACAACCGTTC
TCATACCGTT ACCCGCTGAT CGAAGGGCAA GGCAACTTTG GCTCTTCCGA CGACCCAAAA
TCATTCGCAG CGATGCGCTA CACCGAGTCC AAACTCACCC CCATCTCTGA GATCCTACTC
AGTGAACTAA GCGAAGGTAC AGTGAATTGG ATCACCAACT TCGACGGTAC CTTGGAAGAA
CCTGCATGGC TGCCGAGCCG CCTCCCACAC CTTTTACTTA ACGGCACCAC TGGCATCGCG
GTCGGCATGG CAACCGACGT ACCACCGCAC AATCTCAACG AAATCGCCAG TGCGCTGATT
CACCTGCTTG ACAACCCAAA CGCCACTATT GCCGCGCTGT GCCAATACAT TCGCGGCCCT
GACTACCCAA CGGCTGCCGA GATCATCACA CCACCCAATG ACCTGCAAAA TCTCTACGAG
ACAGGCAATG GCAGCGTGCG TACCCGTGCC ACCTACCATA AAGAAGACGG CAACGTAGTG
ATCACCTCGT TACCTTACCA AGTGTCACCG TCCAAAGTAA TCGAACAGAT CGCCCAGCAA
ATTCGTTCCA AAAAGCTACC CTGGTTGGAC GGCGAAGGGG TACGCGATGA ATCTGACCAC
AAAAATCCAG TGCGTATCGT GCTGTTCCCA CGTTCCCAAC GGATTGATGT AGAACAACTC
ATGGGCCACC TATTCGCAAC CACCGATCTA GAAAAAAGCC ATCGGGTGAA CCTCAACGTG
ATCGGCCTTG ACGGCCGCCC GCAAGTCAAA CCTCTGAAAC AACTGCTCAG CGAATGGCTC
AGTTTCCGCA GCGACACTGT CACCCGCCGT CTCAAGTATC GACTACAAAA AGTTGAGAGT
CGCCTACACC TGCTGGAAGG CTTACTGATC GCCTTTCTCA ACCTTGACAA GGTGATCCAC
ATCATTCGCA ACGAGGACGA ACCCAAGCCA GTCCTGATCG CACGCTTTGG TCTGTCAGAT
GCGCAAACAG AATACATCCT CGACACCAAG CTACGCCAAC TCGCGCGCCT TGAAGAAATG
GCGATTCGCA GTGAACAAGA CGCACTGACT AAAGAACGTG ACGAGATCAA TGTCATCCTG
GATAGCGACG TCCAACTTAA AAAACTAATC AAGGACGAAT TATTGGCAGA TGCCAAGACG
TTCGGCGATG CGCGCCGTGC GCCGCTTGTC GCACGCCAAG CGGCACAGGC CATTGATGAA
AGCGAACTGG TCGCTAGCGA ACCGATGACC GTGGTGCTCT CGGAGAAAGG CTGGATTCGA
GCGGCCAAAG GCCACGACGT CGATCCAAGC GGGATGTTCT ACCGTGAAGG TGATCGCCTT
TTGGCAGCCG TGCGCACCCG CAGCACCCAT CAAGTCTCCT TCCTCGACTC CGAAGGACGT
GCCTATTCAA CACTGGTGCA TACCCTACCC TCGGCACGCG GCAACGGTGA ACCACTGACG
GGACGCTTTT CGCCCGCCCC TGGTGCTTCA TTCCAAGCGA TGGCTAGTGC CGACAACGAC
AAATTATTCG TGTTGGCCTC CTCTCACGGC TACGGTTTCA TCACCCGGTT CGAAAATCTC
ACCGGACGAA ACAAAGCCGG CAAAGCCATG ATTCATCTCA CACCTGGCGC CCAGGTCATG
GGACTAGCTC CGCTGACCAA CGTGCAACAT GACCGCATTG TCGCGGTGAC CAGCGCCGGC
AACCTGCTAG CCATCGCAGC AAGCGAACTC CCTGAACTAG ATAAAGGCAA GGGCAACAAA
CTGATTGATA TTCCAAAAAC AAAACTGGCC ACTGAACGCC TAGTCGCTGT CATCGCAGTC
GCTTCGAGTC ACACCCTACT GCTCTATAGC GGCGAACGCA CAATGCGCCT TTCATTTAAA
GATTTGGAGG CTTACCTTGA TACACGCGGT AGCCGCGGCC AACTACTGCC AAGAGGTTGG
CATAAAATCG ACACACTCGA TATCCAGTAA
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| Protein sequence | MTDLTRPFFH GFEQMPLREY AERAYLDYSM YVVLDRALPF IGDGLKPVQR RIIYAMHELR
LNPKAKPKKS VRAVGDVIGK YHPHGDLACY EALVLMAQPF SYRYPLIEGQ GNFGSSDDPK
SFAAMRYTES KLTPISEILL SELSEGTVNW ITNFDGTLEE PAWLPSRLPH LLLNGTTGIA
VGMATDVPPH NLNEIASALI HLLDNPNATI AALCQYIRGP DYPTAAEIIT PPNDLQNLYE
TGNGSVRTRA TYHKEDGNVV ITSLPYQVSP SKVIEQIAQQ IRSKKLPWLD GEGVRDESDH
KNPVRIVLFP RSQRIDVEQL MGHLFATTDL EKSHRVNLNV IGLDGRPQVK PLKQLLSEWL
SFRSDTVTRR LKYRLQKVES RLHLLEGLLI AFLNLDKVIH IIRNEDEPKP VLIARFGLSD
AQTEYILDTK LRQLARLEEM AIRSEQDALT KERDEINVIL DSDVQLKKLI KDELLADAKT
FGDARRAPLV ARQAAQAIDE SELVASEPMT VVLSEKGWIR AAKGHDVDPS GMFYREGDRL
LAAVRTRSTH QVSFLDSEGR AYSTLVHTLP SARGNGEPLT GRFSPAPGAS FQAMASADND
KLFVLASSHG YGFITRFENL TGRNKAGKAM IHLTPGAQVM GLAPLTNVQH DRIVAVTSAG
NLLAIAASEL PELDKGKGNK LIDIPKTKLA TERLVAVIAV ASSHTLLLYS GERTMRLSFK
DLEAYLDTRG SRGQLLPRGW HKIDTLDIQ
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