| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0605 |
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| Symbol | |
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| ID | 6202002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 714184 |
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| End bp | 717756 |
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| Gene Length | 3573 bp |
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| Protein Length | 1190 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641702142 |
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| Product | histidine kinase |
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| Protein accession | YP_001829323 |
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| Protein GI | 182681163 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG3292] Predicted periplasmic ligand-binding sensor domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGTGTT TGAAGAGGGT GCGGGGGGGG CTGCTGACGG CGCTGCTTGT TTTTGTATCA
CTGTTGACAG CCACAGCGGC GGTGCCGGAG ATGCCTCGCT TCCGTGTGCT TGATGCCACG
AGCGGATTGC CATCCAACGT GGTGCGGGCA ATGCTCCAGG ATGCTGCTGG TTATTTGTGG
TTGGCCACCA GTGATGGTCT GGCGCGCTAT GACGGCACCG CATTCAAGGT GTGGCGGCAT
GATCCTAATG ATCCAGGCTC ATTGCCGGGC GACTCCGTCC TGGCTTTGTA TATTGATGTA
CAGGATAGGA TTTGGGTGTT GTCTGAGAAT GCGGGGCTTG CTGTGCTTGA TGCGCAGCGC
CGTCGCTTCA TCCAGATTCC TGTAGGTTCG GTTGCTAAAA CCGACGCCTT ACATACGCTG
ACCGGTCATG GCGATGCGAT CTGGCTGAGT GATCTACATG CTTCGGTCAT ACGGATTGAT
AGCGCAGGAG CACTCACCCG TTATGCACTG GCTGATGTTT CGCCGACTCT GAAGGATACC
CCGGTTGTCG CGTTGACCTT TGATGCCAAT GGACGGCTGT GGGTGGGCAC GCCTGATGGC
CTACTGTATT TTGAGGCGGG ACGCTTGCAT TTGGCGCCGC CGCCTTTGGA TAAAACCTCG
ATTCATTCCA TTGCTGCCGT GGGTAGCCGA CTGTGGGTTG GCAGTACGGA TGGCGTGTAT
CTTCAGGATG CTGAAGGACG TTGGCGTGCG CCGAACTGGG GGCCAATGTT TGCTTTTGGC
AATCTACTCT TGTCTGTAGC TGATGCTGGT GACGGTGAAT TTTGGTTGGG TAGTGAGCGT
GGTTTGTGGC GTACTCGACA AGAGCGACCG CCAGTACAGA TCCCTTTGAG TGACATGCAT
CACGGTGTGT CCACTGTCTC GTCCTTGTGG CGTGATACGA GTGGAGGACT GTGGGTACCG
GTTTATGGTC GTGGTCTAGG CTATTTGCGC CAGGATTGGA AGCGAATGGC GGTCGTGCGA
CCGAGTGATG GTGGTGAAAG TGCCTATTGC AATGTTGCCC CGGCGGCGTA TTCCGGTGGA
CTTTGGCAAT TGAATCGTAT TGGAGAGTTG ATGCATCTGA ATACCAGCAC CGGTGAGCTG
GTACACACAG GATGGCAGCG TCATGAGCTG CGCGGCGTGA ACATTACCGC CACATTGGAG
GACAGCCGTG GCCGGTTGTG GCTGGCAAAC ATGCAAAATG GTTTATCGCG CCTGGATCTG
AAAAACGGCC AGTGGCGTGA GTGGGCTGCA CATGGAGATG ACGCGGTCCC GCTGTATGGT
CCTATCTCTT GGATCGTGGA AATGCCTGAT AGCAGCCTTT GGCTGGAAGC GTTGGGCGTG
CTGCAGCAGC GGGATCTTGA AAGCGGACGT GTGTTAAATC AGATTGTACC TGGCAGTCAT
GGCCTGGATG GTTCCCGCGT CGAGCAGATC GGCCTTGGCC CAGATGGGCG TTTGTGGCTG
GCTGCTGGTA GTGGCGTGTA TGCCTGGGAG TCACAGCGCC GTATGTTCGT CCCCATACCC
GATTTGACAG GAACACGCGC CTATAGCTTT GTCCCGGTGG GAGGCAATGA AGTTTGGGTG
CATCGGTTAC GGGGCTTGGA GCAATGGCGG CACAGTAGTC ACGGTTGGAA ACGGGTTGCT
TTAGTGGGAC CACAGCATGG GCTGCCTGCC ATGGAGTCGC TAGGGATGCA GCATGACGCA
CAGGGCCGTA TTTGGTTGTC CACACGCCGC GGCCTATGGC GTATCGACAA TACTGATGAG
CTCCAGGTGC GTAACTTCGG TTTGCGTGAT GGTTTGGGCA CCCAGGAGTT TGCTGAGGCC
TGCTTGTGGA TGGCTCCGGA TGGCGTATTG GTTGGCGGCA CTACCGATGG CTACTTGATG
CTGTTTGATA CTGCGATGCC TGACCCAGCC CCATTTGTAC CACAGCTGCG TATGGAGACC
GTCAGTGTGA TCCGTGCTGG GCACCGTATT GATTTGCCGG TTGATCAGCC TTTCGAACTG
CTGCCGAATG ATCGCCAACT GATTGTCGGC GCGCGGTTGC TTTCCTTCGG TGATCCACTG
TCCAACCGCT ACAGTTATTG GTTGAAAGGT TTCGATACCG GGTGGATTGA TCAGGGGAGT
AGCGGTACAC GGGAATTCTC CTCGTTGCCC CCGGCTGACT ACACATTATT GATTCAGGGC
ACCGACCCGA TGGGCAATCT GTCCCGCATC CATCTGGTGA CGTTTCGCGT ATTGCCGCCC
TGGTGGCGCA GTGCGTGGGG GATGAGCGTA TTAACGGGGA GCGGATTGCT ATTGCTCTGG
GGCGTTGCAT GGAACTATCA CCGCCGTTTA CGGCGTCGTG CCCGCTTGCA GCTGGAACAA
CATCAGCGCG AAGTTGCCGA GCGGGCCTCA CTGGCTAAAA CGCAGTTTTT GGCGACGTTG
GGTCACGAGG TACGCACCCC GATGACCGGA GTGCTTGGGA TGAGCGAATT GTTATTGGAA
ACACCGCTTG ATACGCGCCA GCATGGCTAT GCGACCTCGA TCCAAGCGGC AGGTAAGCAC
CTCTTGCGTT TGGTCAATGA TGCCCTGGAT CTGGCCAAAA TCGAGGCTGG AAAACTGTCG
TTGGAACGGC GTGATTTTGA TTTTCATGCC TTGTTGGAAC AGGTGGTGGC AATGATCCGG
CCGATGGTGG AGCGTAAAGG ATTGCGTTTT GTCTATCGAC TGGATCCAGA GGTGCCCCAG
TATGTCCATG GGGATGCTGA TCGACTACAG CAAATTTTGC TCAACCTGTT GATCAACGCC
ACCAAATTTA CCGAGCACGG AGAGGTTGTA TTACAGGTCG CGCCTGGGCA GGAACAAGCC
TGCCTTGGTG TGCGTATTGA CGTGGCCGAT ACCGGCCCTG GGTTGAGTGA AGAACAATGC
CAGCGCTTAT TCCGTCGTTT TGAGCAAGTC AATGGTGCAT CCACCGCAGC CCGCTATGGT
GGCAGCGGAC TTGGTTTGGC CATTTGCCGC GAGTTGGCTA CCGTGATGGA GGGGGAGATC
CACGTAGATA GCGAGCTTGG CAAAGGCACC TGCTTCCGTG TTCTGCTGCC TCTTCCATGG
GTGTTGGCGG TGCAACCTGC GGTTGCCGTT ATGGATATGG AACCCTCACC CTGCTCCAAT
CCGTTGCACT TGCTGCTGAT TGAGGACGAT CCGACAGTGG CGGAGGTGAT CGTCGAACTG
TTGCGTGCCC GTGGGCATCG GGTGACTCAT GCTTTACATG GGTTGGAGGC CTTGGTGGAG
GTGACGCTGA CACGTTTTGA TGCCTGTTTA TGCGATCTAG ATCTCCCGGG ATTGGATGGT
GCCGGATTGA TTGTGCAACT GCGGGCACAG GGGCAGTCCT TTCCAATTGT CGTGGTCACT
GCGCGTACTG ATGCCGATGC CCAGAGGCAG GCGTTCCACG TTGGCTGCGA TGCGTTTTTA
CGCAAACCGG TCACCGGCGA GATGCTGGAG CAGGTGCTCA CCCAGGTGCT GAGTGCGCCT
CGTCAAGACG CTGATGTGGA TACGCCAACA TGA
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| Protein sequence | MRCLKRVRGG LLTALLVFVS LLTATAAVPE MPRFRVLDAT SGLPSNVVRA MLQDAAGYLW
LATSDGLARY DGTAFKVWRH DPNDPGSLPG DSVLALYIDV QDRIWVLSEN AGLAVLDAQR
RRFIQIPVGS VAKTDALHTL TGHGDAIWLS DLHASVIRID SAGALTRYAL ADVSPTLKDT
PVVALTFDAN GRLWVGTPDG LLYFEAGRLH LAPPPLDKTS IHSIAAVGSR LWVGSTDGVY
LQDAEGRWRA PNWGPMFAFG NLLLSVADAG DGEFWLGSER GLWRTRQERP PVQIPLSDMH
HGVSTVSSLW RDTSGGLWVP VYGRGLGYLR QDWKRMAVVR PSDGGESAYC NVAPAAYSGG
LWQLNRIGEL MHLNTSTGEL VHTGWQRHEL RGVNITATLE DSRGRLWLAN MQNGLSRLDL
KNGQWREWAA HGDDAVPLYG PISWIVEMPD SSLWLEALGV LQQRDLESGR VLNQIVPGSH
GLDGSRVEQI GLGPDGRLWL AAGSGVYAWE SQRRMFVPIP DLTGTRAYSF VPVGGNEVWV
HRLRGLEQWR HSSHGWKRVA LVGPQHGLPA MESLGMQHDA QGRIWLSTRR GLWRIDNTDE
LQVRNFGLRD GLGTQEFAEA CLWMAPDGVL VGGTTDGYLM LFDTAMPDPA PFVPQLRMET
VSVIRAGHRI DLPVDQPFEL LPNDRQLIVG ARLLSFGDPL SNRYSYWLKG FDTGWIDQGS
SGTREFSSLP PADYTLLIQG TDPMGNLSRI HLVTFRVLPP WWRSAWGMSV LTGSGLLLLW
GVAWNYHRRL RRRARLQLEQ HQREVAERAS LAKTQFLATL GHEVRTPMTG VLGMSELLLE
TPLDTRQHGY ATSIQAAGKH LLRLVNDALD LAKIEAGKLS LERRDFDFHA LLEQVVAMIR
PMVERKGLRF VYRLDPEVPQ YVHGDADRLQ QILLNLLINA TKFTEHGEVV LQVAPGQEQA
CLGVRIDVAD TGPGLSEEQC QRLFRRFEQV NGASTAARYG GSGLGLAICR ELATVMEGEI
HVDSELGKGT CFRVLLPLPW VLAVQPAVAV MDMEPSPCSN PLHLLLIEDD PTVAEVIVEL
LRARGHRVTH ALHGLEALVE VTLTRFDACL CDLDLPGLDG AGLIVQLRAQ GQSFPIVVVT
ARTDADAQRQ AFHVGCDAFL RKPVTGEMLE QVLTQVLSAP RQDADVDTPT
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