Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0605 |
Symbol | |
ID | 6202002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 714184 |
End bp | 717756 |
Gene Length | 3573 bp |
Protein Length | 1190 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641702142 |
Product | histidine kinase |
Protein accession | YP_001829323 |
Protein GI | 182681163 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [COG3292] Predicted periplasmic ligand-binding sensor domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGTGTT TGAAGAGGGT GCGGGGGGGG CTGCTGACGG CGCTGCTTGT TTTTGTATCA CTGTTGACAG CCACAGCGGC GGTGCCGGAG ATGCCTCGCT TCCGTGTGCT TGATGCCACG AGCGGATTGC CATCCAACGT GGTGCGGGCA ATGCTCCAGG ATGCTGCTGG TTATTTGTGG TTGGCCACCA GTGATGGTCT GGCGCGCTAT GACGGCACCG CATTCAAGGT GTGGCGGCAT GATCCTAATG ATCCAGGCTC ATTGCCGGGC GACTCCGTCC TGGCTTTGTA TATTGATGTA CAGGATAGGA TTTGGGTGTT GTCTGAGAAT GCGGGGCTTG CTGTGCTTGA TGCGCAGCGC CGTCGCTTCA TCCAGATTCC TGTAGGTTCG GTTGCTAAAA CCGACGCCTT ACATACGCTG ACCGGTCATG GCGATGCGAT CTGGCTGAGT GATCTACATG CTTCGGTCAT ACGGATTGAT AGCGCAGGAG CACTCACCCG TTATGCACTG GCTGATGTTT CGCCGACTCT GAAGGATACC CCGGTTGTCG CGTTGACCTT TGATGCCAAT GGACGGCTGT GGGTGGGCAC GCCTGATGGC CTACTGTATT TTGAGGCGGG ACGCTTGCAT TTGGCGCCGC CGCCTTTGGA TAAAACCTCG ATTCATTCCA TTGCTGCCGT GGGTAGCCGA CTGTGGGTTG GCAGTACGGA TGGCGTGTAT CTTCAGGATG CTGAAGGACG TTGGCGTGCG CCGAACTGGG GGCCAATGTT TGCTTTTGGC AATCTACTCT TGTCTGTAGC TGATGCTGGT GACGGTGAAT TTTGGTTGGG TAGTGAGCGT GGTTTGTGGC GTACTCGACA AGAGCGACCG CCAGTACAGA TCCCTTTGAG TGACATGCAT CACGGTGTGT CCACTGTCTC GTCCTTGTGG CGTGATACGA GTGGAGGACT GTGGGTACCG GTTTATGGTC GTGGTCTAGG CTATTTGCGC CAGGATTGGA AGCGAATGGC GGTCGTGCGA CCGAGTGATG GTGGTGAAAG TGCCTATTGC AATGTTGCCC CGGCGGCGTA TTCCGGTGGA CTTTGGCAAT TGAATCGTAT TGGAGAGTTG ATGCATCTGA ATACCAGCAC CGGTGAGCTG GTACACACAG GATGGCAGCG TCATGAGCTG CGCGGCGTGA ACATTACCGC CACATTGGAG GACAGCCGTG GCCGGTTGTG GCTGGCAAAC ATGCAAAATG GTTTATCGCG CCTGGATCTG AAAAACGGCC AGTGGCGTGA GTGGGCTGCA CATGGAGATG ACGCGGTCCC GCTGTATGGT CCTATCTCTT GGATCGTGGA AATGCCTGAT AGCAGCCTTT GGCTGGAAGC GTTGGGCGTG CTGCAGCAGC GGGATCTTGA AAGCGGACGT GTGTTAAATC AGATTGTACC TGGCAGTCAT GGCCTGGATG GTTCCCGCGT CGAGCAGATC GGCCTTGGCC CAGATGGGCG TTTGTGGCTG GCTGCTGGTA GTGGCGTGTA TGCCTGGGAG TCACAGCGCC GTATGTTCGT CCCCATACCC GATTTGACAG GAACACGCGC CTATAGCTTT GTCCCGGTGG GAGGCAATGA AGTTTGGGTG CATCGGTTAC GGGGCTTGGA GCAATGGCGG CACAGTAGTC ACGGTTGGAA ACGGGTTGCT TTAGTGGGAC CACAGCATGG GCTGCCTGCC ATGGAGTCGC TAGGGATGCA GCATGACGCA CAGGGCCGTA TTTGGTTGTC CACACGCCGC GGCCTATGGC GTATCGACAA TACTGATGAG CTCCAGGTGC GTAACTTCGG TTTGCGTGAT GGTTTGGGCA CCCAGGAGTT TGCTGAGGCC TGCTTGTGGA TGGCTCCGGA TGGCGTATTG GTTGGCGGCA CTACCGATGG CTACTTGATG CTGTTTGATA CTGCGATGCC TGACCCAGCC CCATTTGTAC CACAGCTGCG TATGGAGACC GTCAGTGTGA TCCGTGCTGG GCACCGTATT GATTTGCCGG TTGATCAGCC TTTCGAACTG CTGCCGAATG ATCGCCAACT GATTGTCGGC GCGCGGTTGC TTTCCTTCGG TGATCCACTG TCCAACCGCT ACAGTTATTG GTTGAAAGGT TTCGATACCG GGTGGATTGA TCAGGGGAGT AGCGGTACAC GGGAATTCTC CTCGTTGCCC CCGGCTGACT ACACATTATT GATTCAGGGC ACCGACCCGA TGGGCAATCT GTCCCGCATC CATCTGGTGA CGTTTCGCGT ATTGCCGCCC TGGTGGCGCA GTGCGTGGGG GATGAGCGTA TTAACGGGGA GCGGATTGCT ATTGCTCTGG GGCGTTGCAT GGAACTATCA CCGCCGTTTA CGGCGTCGTG CCCGCTTGCA GCTGGAACAA CATCAGCGCG AAGTTGCCGA GCGGGCCTCA CTGGCTAAAA CGCAGTTTTT GGCGACGTTG GGTCACGAGG TACGCACCCC GATGACCGGA GTGCTTGGGA TGAGCGAATT GTTATTGGAA ACACCGCTTG ATACGCGCCA GCATGGCTAT GCGACCTCGA TCCAAGCGGC AGGTAAGCAC CTCTTGCGTT TGGTCAATGA TGCCCTGGAT CTGGCCAAAA TCGAGGCTGG AAAACTGTCG TTGGAACGGC GTGATTTTGA TTTTCATGCC TTGTTGGAAC AGGTGGTGGC AATGATCCGG CCGATGGTGG AGCGTAAAGG ATTGCGTTTT GTCTATCGAC TGGATCCAGA GGTGCCCCAG TATGTCCATG GGGATGCTGA TCGACTACAG CAAATTTTGC TCAACCTGTT GATCAACGCC ACCAAATTTA CCGAGCACGG AGAGGTTGTA TTACAGGTCG CGCCTGGGCA GGAACAAGCC TGCCTTGGTG TGCGTATTGA CGTGGCCGAT ACCGGCCCTG GGTTGAGTGA AGAACAATGC CAGCGCTTAT TCCGTCGTTT TGAGCAAGTC AATGGTGCAT CCACCGCAGC CCGCTATGGT GGCAGCGGAC TTGGTTTGGC CATTTGCCGC GAGTTGGCTA CCGTGATGGA GGGGGAGATC CACGTAGATA GCGAGCTTGG CAAAGGCACC TGCTTCCGTG TTCTGCTGCC TCTTCCATGG GTGTTGGCGG TGCAACCTGC GGTTGCCGTT ATGGATATGG AACCCTCACC CTGCTCCAAT CCGTTGCACT TGCTGCTGAT TGAGGACGAT CCGACAGTGG CGGAGGTGAT CGTCGAACTG TTGCGTGCCC GTGGGCATCG GGTGACTCAT GCTTTACATG GGTTGGAGGC CTTGGTGGAG GTGACGCTGA CACGTTTTGA TGCCTGTTTA TGCGATCTAG ATCTCCCGGG ATTGGATGGT GCCGGATTGA TTGTGCAACT GCGGGCACAG GGGCAGTCCT TTCCAATTGT CGTGGTCACT GCGCGTACTG ATGCCGATGC CCAGAGGCAG GCGTTCCACG TTGGCTGCGA TGCGTTTTTA CGCAAACCGG TCACCGGCGA GATGCTGGAG CAGGTGCTCA CCCAGGTGCT GAGTGCGCCT CGTCAAGACG CTGATGTGGA TACGCCAACA TGA
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Protein sequence | MRCLKRVRGG LLTALLVFVS LLTATAAVPE MPRFRVLDAT SGLPSNVVRA MLQDAAGYLW LATSDGLARY DGTAFKVWRH DPNDPGSLPG DSVLALYIDV QDRIWVLSEN AGLAVLDAQR RRFIQIPVGS VAKTDALHTL TGHGDAIWLS DLHASVIRID SAGALTRYAL ADVSPTLKDT PVVALTFDAN GRLWVGTPDG LLYFEAGRLH LAPPPLDKTS IHSIAAVGSR LWVGSTDGVY LQDAEGRWRA PNWGPMFAFG NLLLSVADAG DGEFWLGSER GLWRTRQERP PVQIPLSDMH HGVSTVSSLW RDTSGGLWVP VYGRGLGYLR QDWKRMAVVR PSDGGESAYC NVAPAAYSGG LWQLNRIGEL MHLNTSTGEL VHTGWQRHEL RGVNITATLE DSRGRLWLAN MQNGLSRLDL KNGQWREWAA HGDDAVPLYG PISWIVEMPD SSLWLEALGV LQQRDLESGR VLNQIVPGSH GLDGSRVEQI GLGPDGRLWL AAGSGVYAWE SQRRMFVPIP DLTGTRAYSF VPVGGNEVWV HRLRGLEQWR HSSHGWKRVA LVGPQHGLPA MESLGMQHDA QGRIWLSTRR GLWRIDNTDE LQVRNFGLRD GLGTQEFAEA CLWMAPDGVL VGGTTDGYLM LFDTAMPDPA PFVPQLRMET VSVIRAGHRI DLPVDQPFEL LPNDRQLIVG ARLLSFGDPL SNRYSYWLKG FDTGWIDQGS SGTREFSSLP PADYTLLIQG TDPMGNLSRI HLVTFRVLPP WWRSAWGMSV LTGSGLLLLW GVAWNYHRRL RRRARLQLEQ HQREVAERAS LAKTQFLATL GHEVRTPMTG VLGMSELLLE TPLDTRQHGY ATSIQAAGKH LLRLVNDALD LAKIEAGKLS LERRDFDFHA LLEQVVAMIR PMVERKGLRF VYRLDPEVPQ YVHGDADRLQ QILLNLLINA TKFTEHGEVV LQVAPGQEQA CLGVRIDVAD TGPGLSEEQC QRLFRRFEQV NGASTAARYG GSGLGLAICR ELATVMEGEI HVDSELGKGT CFRVLLPLPW VLAVQPAVAV MDMEPSPCSN PLHLLLIEDD PTVAEVIVEL LRARGHRVTH ALHGLEALVE VTLTRFDACL CDLDLPGLDG AGLIVQLRAQ GQSFPIVVVT ARTDADAQRQ AFHVGCDAFL RKPVTGEMLE QVLTQVLSAP RQDADVDTPT
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