| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0588 |
|---|
| Symbol | |
|---|
| ID | 6203971 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 695462 |
|---|
| End bp | 696412 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641702125 |
|---|
| Product | rod shape-determining protein MreC |
|---|
| Protein accession | YP_001829306 |
|---|
| Protein GI | 182681146 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1792] Cell shape-determining protein |
|---|
| TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0508667 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCCTCCT ATCCCGGTTT TTCATTAGCG TCTCGTTCGC CAGCAGTTGT CAGCACAATA
CGTTTGCTGA CTTACTTAAC CTTGGCAATT GTGTTGGTTG TGCTCGACAG TCGCGGCGCT
TGGTTGTCGC AGTTGCGGCA GCGGGCTAAC TGGCTGGCGC AGCCGGTGTG GGCGCTGGCT
GGGTTGCCTG GTTGGTTTGG TGGTCAGCTC AGTGAGCGTG CAATCAGTAA TGCGCGTTTG
GTTAACGAGA ACCGTCAGTT GCGCAATCAG CTGTTGATTG CGAATGCCCG TTTGACCCGA
TTGCAAACGG CAGCACGTGA CAATGCCCAG TTGCGTGAGT TGCTTAATTT TGCTGAGCAT
CACGGTCTGG ATGTGCAGTT GGCTCCGATT CTGGATGTTG ATTTGGATCC AACTCGGCAG
CGTCTTGTCC TGGATGCCGG CAGCCGCGAT GGTGTCAGCG TCGGTCAAAC GGTGATTGAT
GCTGGCGGTT TAATGGGTCA GGTGATTGAG GTGACGCCGC TGCATTCAAT TGTTCTGCTG
TTGACCGATC CGGATCACGC TGTGCCGGTG ACTGTGGCAC GTAATGGTGT TCGCTTGATT
GTTTATGGGC GGGGGGATCG CTTAGAGCTG CGCAATATTC CGCTGAGTTC AGGTGTGAAA
ATTGGTGATG TTCTTATTAC TTCAGGGCTG GGAGGGCGTT TCCCGGCTGG TTTCCCGGTG
GGCAATATTT CAGCACTGCA CCCGGATGAT AGCCATGCTT TTCTAGTTGG GGAGATCACG
CCGACAGCCA AGTTGGATCG TGGTCGTAAT GTACTGTTGT TGCGCTTGGG TGGGTCCATG
TCACCTGGTG GTGGAGGGTC GTTAACATCA AGATCTATTA TTGACTCAAA CAGTGAGTCT
CACTCCACCA ATCTTGGCGC TTCCAGGGTA ATCAAGGAGC CGCAGCAATG A
|
|---|
| Protein sequence | MPSYPGFSLA SRSPAVVSTI RLLTYLTLAI VLVVLDSRGA WLSQLRQRAN WLAQPVWALA
GLPGWFGGQL SERAISNARL VNENRQLRNQ LLIANARLTR LQTAARDNAQ LRELLNFAEH
HGLDVQLAPI LDVDLDPTRQ RLVLDAGSRD GVSVGQTVID AGGLMGQVIE VTPLHSIVLL
LTDPDHAVPV TVARNGVRLI VYGRGDRLEL RNIPLSSGVK IGDVLITSGL GGRFPAGFPV
GNISALHPDD SHAFLVGEIT PTAKLDRGRN VLLLRLGGSM SPGGGGSLTS RSIIDSNSES
HSTNLGASRV IKEPQQ
|
|---|
| |